Assessing the quality of finished genomic sequence.

J. SCHMUTZ , J. WHEELER , J. GRIMWOOD , M. DICKSON
Cold Spring Harbor Symposia on Quantitative Biology 68 31 -38

3
2003
Computational Analysis of the Polymorphic Membrane Protein Superfamily of Chlamydia trachomatis and Chlamydia pneumoniae

JANE GRIMWOOD , RICHARD S. STEPHENS
Microbial & Comparative Genomics 4 ( 3) 187 -201

100
1999
EVOLUTIONARY CHANGE IN THREESPINE STICKLEBACKS

DAVID M KINGSLEY12 , BAOLI ZHU , KAZUTOYO OSOEGAWA , PIETER J DE JONG

The DNA sequence and comparative analysis of human chromosome 5

JEREMY Schmutz , JOEL MARTIN , ASTRID TERRY , OLIVIER COURONNE
NATURE-LONDON- 441 ( 7093) 114 -114

2006
Functional and Comparative Genomics of Lignocellulose Degradation by Schizophyllum commune

Luis G. Lugones , Han A. B. Wosten , Robin A. Ohm , Igor V. Grigoriev

2014
A reference sequence of the monoploid genome of sugarcane. [W950]

Jeremy Schmutz , Edwin Van der Vossen , Andrzej Kilian , Carine Charron
Proceedings Plant and Animal Genome XXVI Conference

2018
Diverse Life Styles Encoded in the Genomes of Eighteen Dothideomycetes

Robin A Ohm , Rosie E Bradshaw , Bradford J Condon , Nicolas Feau

2012
A Reference Sequence of the Monoploid Genome of Sugarcane. [W889]

Jeremy Schmutz , Edwin Van der Vossen , Carine Charron , Paul Berkman
Proceedings Plant and Animal Genome XXV Conference

2017
The importance of sequencing depth for a complex transcriptome [W952]

Kumar Pazhany , Adhini Sudhindra , Virginie Perlo , Frikkie Botha
Abstracts workshops of the PAG XXVIII

2020
Leveraging multiple sequencing technologies to generate a haplotype specific assembly of sugarcane R570. [W1018]

Jeremy Schmutz , Adam Healey , Robert Henry , Jane Grimwood
Abstracts workshops of the PAG XXVIII

2020
Sequencing the transcriptome of R570 to explore the complexity of the sugarcane genome [W1019]

Kumar Pazhany , Adhini Sudhindra , Virginie Perlo , Frikkie Botha
Abstracts workshops of the PAG XXVIII

2020
A Reference Sequence of the Monoploid Genome of Sugarcane

Jeremy Schmutz , Edwin van der Vossen , Andrzej Kilian , Carine Charron
Plant and Animal Genome XXVI Conference (January 13 - 17, 2018)

2018
Chromosome fusions shape an ancient UV sex chromosome system

Norman J. Wickett , Stefan A. Rensing , Noe Fernandez-Pozo , Christopher A. Saski
bioRxiv

6
2020
Hybridization History and Repetitive Element Content in the Genome of a Homoploid Hybrid, Yucca gloriosa (Asparagaceae).

Karolina Heyduk , Jeremy Schmutz , Michael R. McKain , Edward V. McAssey
Frontiers in Plant Science 11 573767

1
2021
Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass.

Daniel S. Rokhsar , Michael Udvardi , Stacy Bonos , Francis M. Rouquette
Nature 590 ( 7846) 438 -444

88
2021
Long-read genome sequencing for the molecular diagnosis of neurodevelopmental disorders.

E. Martina Bebin , Jeremy Schmutz , Ryne C. Ramaker , E. Christopher Partridge
Human Genetics and Genomics Advances 2 ( 2) 100023

1
2021
Widespread polycistronic gene expression in green algae.

Steven M. Theg , Daniela Strenkert , Jeremy Schmutz , Sean D. Gallaher
Proceedings of the National Academy of Sciences of the United States of America 118 ( 7)

15
2021
Long-read sequence assembly: a technical evaluation in barley

Zuzana Tulpová , Inmaculada Hernández-Pinzón , Matthew J Moscou , Manuel Spannagl
The Plant Cell

93
2021
Gene disruption by structural mutations drives selection in US rice breeding over the last century.

Anna M. McClung , Brian E. Scheffler , Joshua C. Stein , Doreen H. Ware
PLOS Genetics 17 ( 3)

2021