Gene Silencing, Heterochromatin Formation and DNA Methylation in Neurospora

Keyur K. Adhvaryu , Eric U. Selker , Zachary A. Lewis , Shinji Honda
한국미생물학회 학술대회논문집 62 -62

2013
Antifungal Liposomes Directed by Dectin-2 Offer a Promising Therapeutic Option for Pulmonary Aspergillosis

Suresh Ambati , Zachary A. Lewis , Xiaorong Lin , Richard B. Meagher
Mbio 12 ( 1)

2021
Transcription factor Znf2 coordinates with the chromatin remodeling SWI/SNF complex to regulate cryptococcal cellular differentiation

Jianfeng Lin , Youbao Zhao , Aileen R. Ferraro , Ence Yang
Communications Biology 2 ( 1) 1 -14

8
2019
Methylated DNA is over-represented in whole-genome bisulfite sequencing data.

Lexiang Ji , Takahiko Sasaki , Xiaoxiao Sun , Ping Ma
Frontiers in Genetics 5 341 -341

75
2014
DNA methylation and normal chromosome behavior in Neurospora depend on five components of a histone methyltransferase complex, DCDC.

Zachary A. Lewis , Keyur K. Adhvaryu , Shinji Honda , Anthony L. Shiver
PLOS Genetics 6 ( 11)

78
2010
The LSH/DDM1 Homolog MUS-30 Is Required for Genome Stability, but Not for DNA Methylation in Neurospora crassa

Evelina Y. Basenko , Masayuki Kamei , Lexiang Ji , Robert J. Schmitz
PLOS Genetics 12 ( 1) e1005790

9
2016
Genome-wide redistribution of H3K27me3 is linked to genotoxic stress and defective growth

Evelina Y. Basenko , Takahiko Sasaki , Lexiang Ji , Cameron J. Prybol
Proceedings of the National Academy of Sciences of the United States of America 112 ( 46)

49
2015
High-Density Detection of Restriction-Site-Associated DNA Markers for Rapid Mapping of Mutated Loci in Neurospora

Zachary A. Lewis , Anthony L. Shiver , Nicholas Stiffler , Michael R. Miller
Genetics 177 ( 2) 1163 -1171

53
2007
The Cullin-4 Complex DCDC Does Not Require E3 Ubiquitin Ligase Elements To Control Heterochromatin in Neurospora crassa

Keyur K. Adhvaryu , Jordan D. Gessaman , Shinji Honda , Zachary A. Lewis
Eukaryotic Cell 14 ( 1) 25 -28

15
2015
32
2017
DNA Methylation: Shared and Divergent Features across Eukaryotes.

Robert J. Schmitz , Zachary A. Lewis , Mary G. Goll
Trends in Genetics 35 ( 11) 818 -827

55
2019
Heterochromatin controls γH2A localization in Neurospora crassa.

Takahiko Sasaki , Kelsey L. Lynch , Caitlin V. Mueller , Steven Friedman
Eukaryotic Cell 13 ( 8) 990 -1000

22
2014
Normal Patterns of Histone H3K27 Methylation Require the Histone Variant H2A.Z in Neurospora crassa

Abigail J. Courtney , Masayuki Kamei , Aileen R. Ferraro , Kexin Gai
Genetics 216 ( 1) 51 -66

4
2020
vvd is required for light adaptation of conidiation-specific genes of Neurospora crassa, but not circadian conidiation.

Lori Bailey Shrode , Zachary A. Lewis , Lori D. White , Deborah Bell-Pedersen
Fungal Genetics and Biology 32 ( 3) 169 -181

136
2001
Transcriptional response to glucose starvation and functional analysis of a glucose transporter of Neurospora crassa.

Xin Xie , Heather H. Wilkinson , Alejandro Correa , Zachary A. Lewis
Fungal Genetics and Biology 41 ( 12) 1104 -1119

65
2004
Diverse Pathways Generate MicroRNA-like RNAs and Dicer-Independent Small Interfering RNAs in Fungi

Heng-Chi Lee , Liande Li , Weifeng Gu , Zhihong Xue
Molecular Cell 38 ( 6) 803 -814

366
2010
Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

Nathan A. Baird , Paul D. Etter , Tressa S. Atwood , Mark C. Currey
PLoS ONE 3 ( 10) e3376

2,351
2008
CHD1 Remodels Chromatin and Influences Transient DNA Methylation at the Clock Gene frequency

William J. Belden , Zachary A. Lewis , Eric U. Selker , Jennifer J. Loros
PLoS Genetics 7 ( 7) e1002166

74
2011
KdmB, a Jumonji Histone H3 Demethylase, Regulates Genome-Wide H3K4 Trimethylation and Is Required for Normal Induction of Secondary Metabolism in Aspergillus nidulans

Agnieszka Gacek-Matthews , Harald Berger , Takahiko Sasaki , Kathrin Wittstein
PLOS Genetics 12 ( 8) e1006222

68
2016
The maternal to zygotic transition regulates genome-wide heterochromatin establishment in the zebrafish embryo.

Kathrin Laue , Srivarsha Rajshekar , Abigail J. Courtney , Zachary A. Lewis
Nature Communications 10 ( 1) 1551 -1551

24
2019