Using ``epitomes'' to model genetic diversity: Rational design of HIV vaccine cocktails
Vladimir Jojic , Brendan J. Frey , David Heckerman , Nebojsa Jojic
neural information processing systems 18 587 -594
31
2005
Convex envelopes of complexity controlling penalties: the case against premature envelopment
Suchi Saria , Vladimir Jojic , Daphne Koller
international conference on artificial intelligence and statistics 15 399 -406
22
2011
Tradict enables high fidelity reconstruction of the eukaryotic transcriptome from 100 marker genes
Surojit Biswas , Konstantin Kerner , Paulo Jose Pereira Lima Teixeira , Jeffery L Dangl
bioRxiv 060111
1
2016
3C-GAN: AN CONDITION-CONTEXT-COMPOSITE GENERATIVE ADVERSARIAL NETWORKS FOR GENERATING IMAGES SEPARATELY
Vladimir Jojic , Yeu-Chern Harn
2018
Learning microbial interaction networks from metagenomic count data
Jeffery L. Dangl , Vladimir Jojic , Derek S. Lundberg , Meredith McDonald
arXiv: Quantitative Methods
44
2014
Conservation and divergence in modules of the transcriptional programs of the human and mouse immune systems [preprint]
Tal Shay , Vladimir Jojic , Kavitha Narayan , Katelyn E Sylvia
2018
An Alignment-Free Regression Approach for Estimating Allele-Specific Expression Using RNA-Seq Data
Chen-Ping Fu , Vladimir Jojic , Leonard McMillan
research in computational molecular biology 69 -84
2
2014
HLA-B57 micropolymorphism defines the sequence and conformational breadth of the immunopeptidome.
Patricia T. Illing , Phillip Pymm , Nathan P. Croft , Hugo G. Hilton
Nature Communications 9 ( 1) 4693 -4693
14
2018
Robust multimodal dictionary learning.
Tian Cao , Vladimir Jojic , Shannon Modla , Debbie Powell
medical image computing and computer-assisted intervention 16 259 -266
17
2013
Recognition of HIV-1 Peptides by Host CTL Is Related to HIV-1 Similarity to Human Proteins
Morgane Rolland , David C Nickle , Wenjie Deng , Nicole Frahm
PLOS ONE 2 ( 9)
21
2007
Identification of transcriptional regulators in the mouse immune system
Vladimir Jojic , Tal Shay , Katelyn Sylvia , Or Zuk
Nature Immunology 14 ( 6) 633 -643
145
2013
Deciphering the transcriptional network of the dendritic cell lineage
JC Miller , BD Brown , T Shay , EL Gautier
Nature Immunology 13 ( 9) 888 -899
739
2012
A Panoramic View of Yeast Noncoding RNA Processing
Wen-Tao Peng , Mark D. Robinson , Sanie Mnaimneh , Nevan J. Krogan
Cell 113 ( 7) 919 -933
216
2003
Classification of Prostate Cancer Grades and T-Stages Based on Tissue Elasticity Using Medical Image Analysis
Shan Yang , Vladimir Jojic , Jun Lian , Ronald Chen
medical image computing and computer assisted intervention 627 -635
3
2016
Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states
David Furman , Junlei Chang , Lydia Lartigue , Christopher R Bolen
Nature Medicine 23 ( 2) 174 -184
282
2017
Reconstructing Tissue Properties From Medical Images With Application in Cancer Screening
Shan Yang , Junbang Liang , Vladimir Jojic , Jun Lian
IEEE Transactions on Medical Robotics and Bionics 1 ( 1) 6 -13
2019
An Inflammatory Clock Predicts Multi-morbidity, Immunosenescence and Cardiovascular Aging in Humans
Nazish Sayed , Tianxiang Gao , Robert Tibshirani , Trevor Hastie
bioRxiv 840363
7
2019
Design of synthetic bacterial communities for predictable plant phenotypes.
Sur Herrera Paredes , Tianxiang Gao , Theresa F. Law , Omri M. Finkel
PLOS Biology 16 ( 2)
162
2018
Semi-coupled dictionary learning for deformation prediction
Tian Cao , Nikhil Singh , Vladimir Jojic , Marc Niethammer
international symposium on biomedical imaging 691 -694
13
2015
Learning Microbial Interaction Networks from Metagenomic Count Data
Surojit Biswas , Meredith McDonald , Derek S Lundberg , Jeffery L Dangl
research in computational molecular biology 32 -43
16
2015