2015
Computational solutions for omics data

Jian Peng , Mona Singh , Bonnie Berger
PMC

2013
3DCOMB: Alignment of distantly-related protein structures

Jian Peng , Jinbo Xu , Sheng Wang
F1000Research 2

2011
Efficient fragment-free approach to protein folding

Jian Peng , Jinbo Xu , Feng Zhao
F1000Research 1

2010
Approximate Inference by Intersecting Semidenite Bound and

Nathan Srebro , Jian Peng , Jinbo Xu , Tamir Hazan

2012
Convex Max-Product over Compact Sets for Protein Folding

Jian Peng , David A. Mcallester , Tamir Hazan , Raquel Urtasun
international conference on machine learning 729 -736

2
2011
Low-homology protein threading

Jian Peng , Jinbo Xu
F1000Research 1

16
2010
Protein structure alignment beyond spatial proximity

Jian Peng , Jinbo Xu , Jianzhu Ma , Sheng Wang
F1000Research 4

2013
A conditional neural fields model for protein threading

Jian Peng , Jinbo Xu , Jianzhu Ma , Sheng Wang
F1000Research 4

2013
Low-density locality-sensitive hashing boosts metagenomic binning

Jianyang Zeng , Jian Peng , Bonnie Berger , Yunan Luo
arXiv: Quantitative Methods

4
2016
Complexes Detection in Biological Networks via Diversified Dense Subgraphs Mining

Jiawei Han , Jingjing Wang , Guangyu Zhou , Xiuli Ma
arXiv: Molecular Networks

2016
Compressively-accelerated read mapping framework for next-generation sequencing

Deniz Yorukoglu , Jian Peng , Bonnie Berger Leighton

3
2015
Compressive genomics for protein databases

Lenore J. Cowen , Andrew Gallant , Jian Peng , Michael Hartmann Baym
Oxford University Press

2013
Exploiting ontology graph for predicting sparsely annotated gene function

Hyunghoon Cho , Jian Peng , ChengXiang Zhai , Bonnie Berger Leighton
Oxford University Press

2015
Learning to Play in a Day: Faster Deep Reinforcement Learning by Optimality Tightening

Alexander G. Schwing , Jian Peng , Jian Peng , Frank S. He
arXiv: Learning

33
2016
Learning to Play in a Day: Faster Deep Reinforcement Learning by Optimality Tightening

Alexander G. Schwing , Jian Peng , Jian Peng , Frank S. He
arXiv: Learning

33
2016
A Quantitative Chaperone Interaction Network Reveals the Architecture of Cellular Protein Homeostasis Pathways

Irina Krykbaeva , Anne-Claude Gingras , Mikko Taipale , Zhen-Yuan Lin
PMC

2014
On the Interpretability of Conditional Probability Estimates in the Agnostic Setting

Aditya Parameswaran , Jian Peng , Jian Peng , Yihan Gao
arXiv: Learning

2015