Subtype-specific differences in transmission cluster dynamics of HIV-1 B and CRF01_AE in New South Wales, Australia.

Francesca Di Giallonardo , Angie N Pinto , Phillip Keen , Ansari Shaik
Journal of the International AIDS Society 24 ( 1)

1
2021
Virome composition in marine fish revealed by meta-transcriptomics.

Francesca Di Giallonardo , David R Bellwood , Jemma L Geoghegan , Jemma L Geoghegan
Virus Evolution 7 ( 1)

38
2021
Metagenomic sequencing reveals a lack of virus exchange between native and invasive freshwater fish across the Murray-Darling Basin, Australia.

Jemma L Geoghegan , Jemma L Geoghegan , Jemma L Geoghegan , Jane E Williamson
Virus Evolution 7 ( 1)

2021
Use of Genomics to Track Coronavirus Disease Outbreaks, New Zealand.

Olin K Silander , Jemma L Geoghegan , Nikki E Freed , Joep de Ligt
Emerging Infectious Diseases 27 ( 5) 1317 -1322

2
2021
Red fox viromes in urban and rural landscapes.

Sarah J Campbell , Wilbur Ashley , Margarita Gil-Fernandez , Thomas M Newsome
Virus Evolution 6 ( 2)

1
2020
Red fox viromes across an urban-rural gradient

Sarah J Campbell , Wilbur Ashley , Margarita Gil-Fernandez , Thomas M. Newsome
bioRxiv

2020
Hidden diversity and evolution of viruses in market fish.

Jemma L Geoghegan , Francesca Di Giallonardo , Kate Cousins , Mang Shi
Virus Evolution 4 ( 2) 1 -11

34
2018
The power and limitations of genomics to track COVID-19 outbreaks: a case study from New Zealand

Jemma L Geoghegan , Jordan Douglas , Xiaoyun Ren , Matthew Storey
medRxiv

2
2020
Tracking the international spread of SARS-CoV-2 lineages B. 1.1. 7 and B. 1.351/501Y-V2 with grinch

Áine O'Toole , Verity Hill , Oliver G Pybus , Alexander Watts
Wellcome Open Research 6

133
2021
Tracing the international arrivals of SARS-CoV-2 Omicron variants after Aotearoa New Zealand reopened its border

Jordan Douglas , David Winter , Andrea McNeill , Sam Carr
Nature Communications 13 ( 1) 6484

1
2022
The origins of SARS-CoV-2: A critical review

Edward C Holmes , Stephen A Goldstein , Angela L Rasmussen , David L Robertson
Cell 184 ( 19) 4848 -4856

309
2021
Real-time genomics for tracking severe acute respiratory syndrome coronavirus 2 border incursions after virus elimination, New Zealand

Jordan Douglas , Jemma L Geoghegan , James Hadfield , Remco Bouckaert
Emerging infectious diseases 27 ( 9) 2361

27
2021
From elimination to suppression: genomic epidemiology of a large Delta SARS-CoV-2 outbreak in Aotearoa New Zealand

Lauren Jelley , Jordan Douglas , Xiaoyun Ren , David Winter
medRxiv 2022 -04

2
2022
10
2022
Exploring the depth and breadth of the genomics toolbox during the COVID-19 pandemic: insights from Aotearoa New Zealand

Michael Bunce , Jemma L Geoghegan , David Winter , Joep de Ligt
BMC medicine 21 ( 1) 213 -213

1
2023
Limited cross-species virus transmission in a spatially restricted coral reef fish community

Vincenzo A Costa , David R Bellwood , Jonathon CO Mifsud , Kate Van Brussel
Virus Evolution 9 ( 1) vead011 -vead011

9
2023
Limited transmission of microbial species among coral reef fishes from the Great Barrier Reef, Australia

Vincenzo A Costa , David R Bellwood , Jonathon CO Mifsud , Jemma L Geoghegan
bioRxiv 2024.02. 24.581894 -2024.02. 24.581894

1
2024