Cell-cycle-dependent transcriptional and translational DNA-damage response of 2 ribonucleotide reductase genes in S. cerevisiae

Mark Bathe , Leona D. Samson , Aprotim Mazumder , Katja Tummler
American Society for Biochemistry and Molecular Biology

2012
Sequence-controlled polymer random access memory storage

James Banal , Mark Bathe , Remi Veneziano , Tyson Shepherd

3
2017
Solution Structure and Mechanical Properties of Anionic Glycosaminoglycans Computed via Molecular Simulation

Bruce Tidor , Alan J. Grodzinsky , Mark Bathe , Gregory C. Rutledge
APS 2004

2004
Programming Structured DNA Assemblies to Probe Biophysical Processes

Eike-Christian Wamhoff , James L. Banal , Mark Bathe , Remi Veneziano
PMC

50
2019
Arbitrary Boolean logical search operations on massive molecular file systems

Paul C. Blainey , Paul C. Blainey , James L. Banal , Mark Bathe
bioRxiv

2
2020
Implementing the NEET Ways of Thinking at MIT

Edward F. Crawley , Amitava "Babi" Mitra , Rea Lavi , Mark Bathe
2020 ASEE Virtual Annual Conference Content Access

2020
Engineering couplings for exciton transport using synthetic DNA scaffolds

Yuliia Vyborna , James L. Banal , Mark Bathe , Amro Dodin
Chem 7 ( 3) 752 -773

39
2021
Autonomous Computing Materials.

Mark Bathe , Raghu Machiraju , Takaki Komiyama , Sanghamitra Neogi
ACS Nano 15 ( 3) 3586 -3592

2021
Nanoscale 2D and 3D patterning using programmed DNA assemblies

Mark Bathe
Novel Patterning Technologies 2021 11610 1161012

2021
2009
Accelerated Subspace Iteration Method for Protein Normal Mode Analysis

Reza Sharifi Sedeh , Mark Bathe , Klaus-Jürgen Bathe
Biophysical Journal 96 ( 3) 4 -7

2009
Tract-specific analysis improves sensitivity of spinal cord diffusion MRI to cross-sectional and longitudinal changes in amyotrophic lateral sclerosis

Pramod Kumar Pisharady , Lynn E. Eberly , Ian Cheong , Georgios Manousakis
Communications Biology 3 ( 1) 370 -370

1
2020
Conformational dynamics data bank: a database for conformational dynamics of proteins and supramolecular protein assemblies

Do-Nyun Kim , Josiah Altschuler , Campbell Strong , Gaël McGill
Nucleic Acids Research 39 451 -455

12
2011
Quantitative prediction of 3D solution shape and flexibility of nucleic acid nanostructures

Do-Nyun Kim , Fabian Kilchherr , Hendrik Dietz , Mark Bathe
Nucleic Acids Research 40 ( 7) 2862 -2868

368
2012
Super-Resolution Fingerprinting Detects Chemical Reactions and Idiosyncrasies of Single DNA Pegboards

Alexander Johnson-Buck , Jeanette Nangreave , Do-Nyun Kim , Mark Bathe
Nano Letters 13 ( 2) 728 -733

24
2013
Objective, Bayesian Analysis of Fluorescence Correlation Spectroscopy Data

Jun He , Mark Bathe
Biophysical Journal 100 ( 3)

2011
Conformational Dynamics and Allostery of Supramolecular Protein Assemblies: from the Nuclear Pore Complex to GroEL

Do-Nyun Kim , Cong-Tri Nguyen , Mark Bathe
Biophysical Journal 100 ( 3) 1 -2

2011
A DNA-Based Building Block for Designer Excitonic Circuits

Etienne Boulais , Nicolas Sawaya , Rémi Veneziano , Alessio Andreoni
Biophysical Journal 110 ( 3)

2016