Nils Woetzel
机构: MPI for Developmental Biology
每年引用次数
引用次数
引用: 1,189
H-指数: 14
I10-指数 : 17
出版物: 21
Poster: GPU-accelerated rigid body fitting of atomic structures into electron density maps
E W Lowe , N Woetzel , J Meiler
international conference on computational advances in bio and medical sciences 265 -265
1
2011
GPU-accelerated machine learning techniques enable QSAR modeling of large HTS data
E. W. Lowe , M. Butkiewicz , N. Woetzel , J. Meiler
computational intelligence in bioinformatics and computational biology 314 -320
6
2012
BCL::MP‐fold: Membrane protein structure prediction guided by EPR restraints
Nils Woetzel , Jens Meiler , Axel W. Fischer , Mert Karakas
Proteins 83 ( 11) 1947 -1962
24
2015
Cryo-EM Guided de novo Protein Fold Elucidation
Steffen Lindert , Rene Staritzbichler , Nils Woetzel , Mert Karakas
Biophysical Journal 96 ( 3)
2009
BCL::EM-Fit: rigid body fitting of atomic structures into density maps using geometric hashing and real space refinement.
Nils Woetzel , Steffen Lindert , Phoebe L. Stewart , Jens Meiler
Journal of Structural Biology 175 ( 3) 264 -276
26
2011
Solvent accessible surface area approximations for rapid and accurate protein structure prediction
Elizabeth Durham , Brent Dorr , Nils Woetzel , René Staritzbichler
Journal of Molecular Modeling 15 ( 9) 1093 -1108
110
2009
Bcl::Cluster: A method for clustering biological molecules coupled with visualization in the Pymol Molecular Graphics System
Nathan Alexander , Nils Woetzel , Jens Meiler
international conference on computational advances in bio and medical sciences 2011 13 -18
124
2011
Poster: GPU-accelerated artificial neural network for QSAR modeling
Edward W. Lowe , Nils Woetzel , Jens Meiler
international conference on computational advances in bio and medical sciences 254 -254
1
2011
Simultaneous prediction of protein secondary structure and transmembrane spans
Julia Koehler Leman , Ralf Mueller , Mert Karakas , Nils Woetzel
Proteins: Structure, Function, and Bioinformatics 81 ( 7) 1127 -1140
47
2013
BCL::Fold—Protein topology determination from limited NMR restraints
Brian E. Weiner , Nathan Alexander , Louesa R. Akin , Nils Woetzel
Proteins 82 ( 4) 587 -595
22
2014
BCL::SAXS: GPU Accelerated Debye Method for computation of Small Angle X Ray Scattering Profiles
Daniel K. Putnam , Brian E. Weiner , Nils Woetzel , Edward W. Lowe
Proteins 83 ( 8) 1500 -1512
12
2015
A unified hydrophobicity scale for multispan membrane proteins
Julia Koehler , Nils Woetzel , René Staritzbichler , Charles R. Sanders
Proteins 76 ( 1) 13 -29
38
2009
BCL::Score--knowledge based energy potentials for ranking protein models represented by idealized secondary structure elements.
Nils Woetzel , Mert Karakaş , Rene Staritzbichler , Ralf Müller
PLOS ONE 7 ( 11)
38
2012
BCL::Fold--de novo prediction of complex and large protein topologies by assembly of secondary structure elements.
Brian E. Weiner , Jens Meiler , Mert Karakaş , Nils Woetzel
PLOS ONE 7 ( 11)
40
2012
BCL::MP-fold: folding membrane proteins through assembly of transmembrane helices.
Brian E. Weiner , Nils Woetzel , Mert Karakaş , Nathan Alexander
Structure 21 ( 7) 1107 -1117
37
2013
Structure and mechanism of the phage T4 recombination mediator protein UvsY.
Stefan Gajewski , Michael Brett Waddell , Sivaraja Vaithiyalingam , Amanda Nourse
Proceedings of the National Academy of Sciences of the United States of America 113 ( 12) 3275 -3280
7
2016
BCL::contact-low confidence fold recognition hits boost protein contact prediction and de novo structure determination.
Mert Karakaş , Nils Woetzel , Jens Meiler
Journal of Computational Biology 17 ( 2) 153 -168
5
2010
Ab initio protein modeling into CryoEM density maps using EM-Fold
Steffen Lindert , Tommy Hofmann , Nils Wötzel , Mert Karakaş
Biopolymers 97 ( 9) 669 -677
21
2012
EM-Fold: De Novo Folding of α-Helical Proteins Guided by Intermediate-Resolution Electron Microscopy Density Maps
Steffen Lindert , René Staritzbichler , Nils Wötzel , Mert Karakaş
Structure 17 ( 7) 990 -1003
72
2009
EM-Fold: De Novo Atomic-Detail Protein Structure Determination from Medium-Resolution Density Maps
Steffen Lindert , Nathan Alexander , Nils Wötzel , Mert Karakaş
Structure 20 ( 3) 464 -478
74
2012