Functional Genomics of a Symbiotic Community: Shared Traits in the Olive Fruit Fly Gut Microbiota.

Frances Blow , Anastasia Gioti , Ian B Goodhead , Maria Kalyva
Genome Biology and Evolution 12 ( 2) 3778 -3791

7
2020
Two hundred and five newly assembled mitogenomes provide mixed evidence for rivers as drivers of speciation for Amazonian primates

Mareike C Janiak , Felipe E Silva , Robin MD Beck , Dorien de Vries
Molecular ecology 31 ( 14) 3888 -3902

2
2022
Total evidence phylogeny of platyrrhine primates and a comparison of undated and tip-dating approaches

Robin MD Beck , Dorien de Vries , Mareike C Janiak , Ian B Goodhead
Journal of Human Evolution 174 103293 -103293

12
2023
Comparison of dental topography of marmosets and tamarins (Callitrichidae) to other platyrrhine primates using a novel freeware pipeline

Dorien de Vries , Mareike C Janiak , Romina Batista , Jean P Boubli
Journal of Mammalian Evolution 31 ( 1) 12 -12

1
2024
Comparative analysis of gene prediction tools for viral genome annotation

Enrique González-Tortuero , Revathy Krishnamurthi , Heather E Allison , Ian B Goodhead
bioRxiv 2021.12. 11.472104 -2021.12. 11.472104

3
2021
Understanding the impact of temperate bacteriophages on their lysogens through transcriptomics

Revathy Krishnamurthi , Enrique González-Tortuero , Grace Plahe , Ian B Goodhead
Journal of Visualized Experiments

1
2023
Functional genomics of a symbiotic community: shared traits in the olive fruit fly gut microbiota

Frances Blow , Anastasia Gioti , Ian B Goodhead , Maria Kalyva
Genome Biology and Evolution

27
2019
Large-scale and significant expression from pseudogenes in Sodalis glossinidius – a facultative bacterial endosymbiont

Ian Goodhead , Frances Blow , Philip Brownridge , Margaret Hughes
Microbial genomics 6 ( 1)

5
2020
Campylobacter jejuni transcriptome changes during loss of culturability in water

Christina Bronowski , Kasem Mustafa , Ian Goodhead , Chloe E. James
PLOS ONE 12 ( 11) e0188936

10
2017
A simple procedure for directly obtaining haplotype sequences of diploid genomes

Harry A. Noyes , Derek Daly , Ian Goodhead , Suzanne Kay
BMC Genomics 16 ( 1) 642 -642

1
2015
Population genomics of domestic and wild yeasts

Gianni Liti , David M. Carter , Alan M. Moses , Jonas Warringer
Nature 458 ( 7236) 337 -341

1,564
2009
Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

Brian T. Wilhelm , Samuel Marguerat , Stephen Watt , Falk Schubert
Nature 453 ( 7199) 1239 -1243

1,166
2008
Evolutionary trade-offs associated with loss of PmrB function in host-adapted Pseudomonas aeruginosa

Laura Bricio-Moreno , Victoria H. Sheridan , Ian Goodhead , Stuart Armstrong
Nature Communications 9 ( 1) 2635 -2635

13
2018
Insights into hominid evolution from the gorilla genome sequence

Aylwyn Scally , Julien Y Dutheil , LaDeana W Hillier , Gregory E Jordan
Nature 483 ( 7388) 169 -175

552
2012
How do temperate bacteriophages affect the fitness of Pseudomonas aeruginosa

Grace Plahe , Heather E. Alison , Ian Goodhead , Chloe James
Access Microbiology 2 537

2020
ApiAP2 Factors as Candidate Regulators of Stochastic Commitment to Merozoite Production in Theileria annulata

Marta Pieszko , William Weir , Ian Goodhead , Jane Kinnaird
PLOS Neglected Tropical Diseases 9 ( 8) e0003933

18
2015
Taking the pseudo out of pseudogenes.

Ian Goodhead , Alistair C Darby
Current Opinion in Microbiology 23 102 -109

46
2015
Fifty important research questions in microbial ecology

Rachael E. Antwis , Sarah M. Griffiths , Xavier A. Harrison , Paz Aranega-Bou
FEMS Microbiology Ecology 93 ( 5) 044

63
2017