An allosteric model for control of pore opening by substrate binding in the EutL microcompartment shell protein.

Michael C. Thompson , Duilio Cascio , David J. Leibly , Todd O. Yeates
Protein Science 24 ( 6) 956 -975

24
2015
Allosteric Inhibitors, Crystallography, and Comparative Analysis Reveal Network of Coordinated Movement across Human Herpesvirus Proteases.

Timothy M. Acker , Jonathan E. Gable , Markus-Frederik Bohn , Priyadarshini Jaishankar
Journal of the American Chemical Society 139 ( 34) 11650 -11653

7
2017
A challenging interpretation of a hexagonally layered protein structure

Michael C. Thompson , Todd O. Yeates
Acta Crystallographica Section D-biological Crystallography 70 ( 1) 203 -208

4
2014
Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism.

Michael C. Thompson , Duilio Cascio , Todd O. Yeates
Acta Crystallographica Section D-biological Crystallography 74 ( 5) 411 -421

6
2018
Structure of a bacterial microcompartment shell protein bound to a cobalamin cofactor

Michael C. Thompson , Christopher S. Crowley , Jeffrey Kopstein , Thomas A. Bobik
Acta Crystallographica Section F-structural Biology and Crystallization Communications 70 ( 12) 1584 -1590

13
2014
Advances in methods for atomic resolution macromolecular structure determination.

Michael C. Thompson , Todd O. Yeates , Jose A. Rodriguez
F1000Research 9 667

2
2020
Temperature-jump solution X-ray scattering reveals distinct motions in a dynamic enzyme

Michael C. Thompson , Benjamin A. Barad , Alexander M. Wolff , Hyun Sun Cho
Nature Chemistry 11 ( 11) 1058 -1066

18
2019
Flexibility and Design: Conformational Heterogeneity along the Evolutionary Trajectory of a Redesigned Ubiquitin.

Justin T. Biel , Michael C. Thompson , Christian N. Cunningham , Jacob E. Corn
Structure 25 ( 5) 739 -749

11
2017
Identification of a unique Fe-S cluster binding site in a glycyl-radical type microcompartment shell protein.

Michael C. Thompson , Nicole M. Wheatley , Julien Jorda , Michael R. Sawaya
Journal of Molecular Biology 426 ( 19) 3287 -3304

16
2014
Expanding the space of protein geometries by computational design of de novo fold families.

Xingjie Pan , Michael C. Thompson , Yang Zhang , Lin Liu
Science 369 ( 6507) 1132 -1136

34
2020
Ensemble-based enzyme design can recapitulate the effects of laboratory directed evolution in silico

Aron Broom , Rojo V. Rakotoharisoa , Michael C. Thompson , Niayesh Zarifi
Nature Communications 11 ( 1) 4808

53
2020
Mix-and-inject XFEL crystallography reveals gated conformational dynamics during enzyme catalysis

Medhanjali Dasgupta , Dominik Budday , Saulo H. P. de Oliveira , Peter Madzelan
Proceedings of the National Academy of Sciences 116 ( 51) 25634 -25640

2019
Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.

Marion Schuller , Galen J Correy , Stefan Gahbauer , Daren Fearon
Science Advances 7 ( 16)

75
2021
Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography

Daniel A Keedy , Lillian R Kenner , Matthew Warkentin , Rahel A Woldeyes
eLife 4

90
2015
The protein shells of bacterial microcompartment organelles

Todd O Yeates , Michael C Thompson , Thomas A Bobik
Current Opinion in Structural Biology 21 ( 2) 223 -231

151
2011
Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography

Alexander M Wolff , Eriko Nango , Iris D Young , Aaron S Brewster
Nature Chemistry 15 ( 11) 1549 -1558

19
2023
Accurate positioning of functional residues with robotics-inspired computational protein design

Cody Krivacic , Kale Kundert , Xingjie Pan , Roland A Pache
Proceedings of the National Academy of Sciences 119 ( 11) e2115480119 -e2115480119

8
2022
Computational remodeling of an enzyme conformational landscape for altered substrate selectivity

Antony D St-Jacques , Joshua M Rodriguez , Matthew G Eason , Scott M Foster
Nature Communications 14 ( 1) 6058 -6058

9
2023
Generation of bright monomeric red fluorescent proteins via computational design of enhanced chromophore packing

Sandrine Legault , Derek P Fraser-Halberg , Ralph L McAnelly , Matthew G Eason
Chemical Science 13 ( 5) 1408 -1418

8
2022