Probing Native Protein Structures by Chemical Cross-linking, Mass Spectrometry, and Bioinformatics

Thomas Walzthoeni , Thomas Walzthoeni , Franz Herzog , Ruedi Aebersold
HASH(0x7fc93e0725c0) 9 1634 -1649

525
2010
Using iRT, a normalized retention time for more targeted measurement of peptides

Claudia Escher , Lukas Reiter , Brendan MacLean , Reto Ossola
Proteomics 12 ( 8) 1111 -1121

347
2012
Molecular architecture of human polycomb repressive complex 2

Claudio Ciferri , Gabriel C Lander , Alessio Maiolica , Franz Herzog
eLife 1 ( 1) 165 -189

186
2012
False discovery rate estimation for cross-linked peptides identified by mass spectrometry

Thomas Walzthoeni , Manfred Claassen , Alexander Leitner , Franz Herzog
Nature Methods 9 ( 9) 901 -903

285
2012
Cross-Link Guided Molecular Modeling with ROSETTA

Abdullah Kahraman , Franz Herzog , Alexander Leitner , George Rosenberger
PLoS ONE 8 ( 9) e73411

115
2013
Titanium dioxide as a chemo-affinity solid phase in offline phosphopeptide chromatography prior to HPLC-MS/MS analysis

Michael Mazanek , Goran Mituloviæ , Franz Herzog , Christoph Stingl
Nature Protocols 2 ( 5) 1059 -1069

133
2007
GraFix: sample preparation for single-particle electron cryomicroscopy

Berthold Kastner , Niels Fischer , Monika Mariola Golas , Bjoern Sander
Nature Methods 5 ( 1) 53 -55

328
2008
Mec1, INO80, and the PAF1 complex cooperate to limit transcription replication conflicts through RNAPII removal during replication stress

Jérôme Poli , Christian-Benedikt Gerhold , Alessandro Tosi , Nicole Hustedt
Genes & Development 30 ( 3) 337 -354

62
2016
Fuzzy Interactions Form and Shape the Histone Transport Complex

Nives Ivic , Mia Potocnjak , Victor Solis-Mezarino , Franz Herzog
Molecular Cell 73 ( 6) 1191 -1203.e6

8
2019
Insights from the reconstitution of the divergent outer kinetochore of Drosophila melanogaster

Yahui Liu , Arsen Petrovic , Pascaline Rombaut , Shyamal Mosalaganti
Open Biology 6 ( 2) 150236 -150236

27
2016
A conserved filamentous assembly underlies the structure of the meiotic chromosome axis.

Alan MV West , Scott C Rosenberg , Sarah N Ur , Madison K Lehmer
eLife 8

49
2019
Structural and functional insights into the fly microRNA biogenesis factor Loquacious.

Leonhard Jakob , Thomas Treiber , Nora Treiber , Alexander Gust
RNA 22 ( 3) 383 -396

8
2016
Crosslinking-MS analysis reveals RNA polymerase I domain architecture and basis of rRNA cleavage

Stefan Jennebach , Franz Herzog , Ruedi Aebersold , Patrick Cramer
Nucleic Acids Research 40 ( 12) 5591 -5601

53
2012
Proteasome assembly from 15S precursors involves major conformational changes and recycling of the Pba1–Pba2 chaperone

Malte Kock , Maria M. Nunes , Matthias Hemann , Sebastian Kube
Nature Communications 6 ( 1) 6123

30
2015
Insights from biochemical reconstitution into the architecture of human kinetochores

John R. Weir , Alex C. Faesen , Kerstin Klare , Arsen Petrovic
Nature 537 ( 7619) 249 -253

102
2016
xVis: a web server for the schematic visualization and interpretation of crosslink-derived spatial restraints

Maximilian Grimm , Tomasz Zimniak , Abdullah Kahraman , Franz Herzog
Nucleic Acids Research 43

87
2015
A modular open platform for systematic functional studies under physiological conditions

Christopher B. Mulholland , Martha Smets , Elisabeth Schmidtmann , Susanne Leidescher
Nucleic Acids Research 43 ( 17)

28
2015
Identification of cell cycle-dependent phosphorylation sites on the anaphase-promoting complex/cyclosome by mass spectrometry.

Franz Herzog , Karl Mechtler , Jan‐Michael Peters
Methods in Enzymology 398 231 -245

17
2005
Large-scale purification of the vertebrate anaphase-promoting complex/cyclosome.

Franz Herzog , Jan‐Michael Peters
Methods in Enzymology 398 175 -195

17
2005
Molecular Basis of Transcription-Coupled Pre-mRNA Capping.

Fuensanta W. Martinez-Rucobo , Rebecca Kohler , Michiel van de Waterbeemd , Albert J.R. Heck
Molecular Cell 58 ( 6) 1079 -1089

126
2015