Manual Segmentation of Fiber Tracts with Bundles of Interest

Avesani Paolo , Garyfallidis Eleftherios , Olivetti Emanuele , Gerhard Stephan
Frontiers in Neuroinformatics 8

2014
A software application for real-time, clustering-based exploration of tractographies

Garyfallidis Eleftherios , Gerhard Stephan , Paolo Avesani , Thien Bao Nguyen

2012
Dipy, a library for the analysis of diffusion MRI data

Garyfallidis Eleftherios , Brett Matthew , Amirbekian Bagrat , Rokem Ariel
Frontiers in neuroinformatics 8 ( 8)

27
2014
Dipy-a novel software library for diffusion MR and tractography

Garyfallidis Eleftherios , Brett Matthew , Amirbekian Bagrat , Nguyen Christopher

2011
Cleaning output of tractography via fiber to bundle coherence, a new open source implementation

Eleftherios Garyfallidis , R Remco Duits , Spl Stephan Meesters , GR Gonzalo Sanguinetti
Organization for Human Brain Mapping Annual Meeting, 26-30 June 2016,: OHBM2016

2
2016
Fast implementations of contextual PDE's for HARDI data processing in DIPY

Eleftherios Garyfallidis , R Remco Duits , Spl Stephan Meesters , GR Gonzalo Sanguinetti
24th ISMRM Annual Meeting and Exhibition, May 7-13, 2016, Singapore

3
2016
Direct native-space fiber bundle alignment for group comparisons

Maxime Descoteaux , Eleftherios Garyfallidis , Demian Wassermann
International Society for Magnetic Resonance Imaging (ISMRM)

2
2014
Particle Swarm Optimization in Multi-Tensor Imaging

Maxime Descoteaux , Eleftherios Garyfallidis , Pierrick Coupé , Samuel St-Jean
international symposium on biomedical imaging 16

2013
Constrained spherical deconvolution on signal and ODF values

Maxime Descoteaux , Eleftherios Garyfallidis , Pierrick Coupé , Michael Paquette
international symposium on biomedical imaging 17

1
2013
Deconvolution enhanced Generalized Q-Sampling 2 and DSI deconvolution

Maxime Descoteaux , Eleftherios Garyfallidis , Pierrick Coupé , Michael Paquette
international symposium on biomedical imaging 18

1
2013
Patch2Self: Denoising Diffusion MRI with Self-Supervised Learning

Eleftherios Garyfallidis , Joshua Batson , Shreyas Fadnavis
neural information processing systems 33 16293 -16303

51
2020
Brainhack: developing a culture of open, inclusive, community-driven neuroscience

Rémi Gau , Stephanie Noble , Katja Heuer , Katherine L Bottenhorn
Neuron 109 ( 11) 1769 -1775

2021
Identifying Vulnerable Brain Networks in Mouse Models of Genetic Risk Factors for Late Onset Alzheimer's Disease.

Alexandra Badea , Wenlin Wu , Jordan Shuff , Michele Wang
Frontiers in Neuroinformatics 13 72

9
2019
QuickBundles, a Method for Tractography Simplification

Eleftherios Garyfallidis , Matthew Brett , Marta Morgado Correia , Guy B. Williams
Frontiers in Neuroscience 6 175 -175

164
2012
The Approximation of the Dissimilarity Projection

Emanuele Olivetti , Thien Bao Nguyen , Eleftherios Garyfallidis
international workshop on pattern recognition in neuroimaging 85 -88

14
2012
Fast Clustering for Interactive Tractography Segmentation

Emanuele Olivetti , Thien Bao Nguyen , Eleftherios Garyfallidis , Nivedita Agarwal
international workshop on pattern recognition in neuroimaging 42 -45

12
2013
Tractometer: towards validation of tractography pipelines.

Marc-Alexandre Côté , Gabriel Girard , Arnaud Boré , Eleftherios Garyfallidis
Medical Image Analysis 17 ( 7) 844 -857

147
2013
Robust and efficient linear registration of white-matter fascicles in the space of streamlines.

Eleftherios Garyfallidis , Omar Ocegueda , Demian Wassermann , Maxime Descoteaux
NeuroImage 117 ( 117) 124 -140

43
2015
The sensitivity of diffusion MRI to microstructural properties and experimental factors.

Maryam Afzali , Tomasz Pieciak , Sharlene Newman , Eleftherios Garyfallidis
Journal of Neuroscience Methods 347 108951

6
2021
Semi-Automatic Segmentation of Optic Radiations and LGN, and Their Relationship to EEG Alpha Waves

Emmanuelle Renauld , Maxime Descoteaux , Michaël Bernier , Eleftherios Garyfallidis
PLOS ONE 11 ( 7)

10
2016