Improving collaboration by standardization efforts in systems biology.

Andreas Dräger , Bernhard Ø. Palsson
Frontiers in Bioengineering and Biotechnology 2 61 -61

47
2014
INFERRING GENE REGULATORY NETWORKS BY MACHINE LEARNING METHODS

JOCHEN SUPPER , HOLGER FRÖHLICH , CHRISTIAN SPIETH , ANDREAS DRÄGER
asia-pacific bioinformatics conference 247 -256

5
2007
Systems Biology Markup Language (SBML) Level 2 Version 5: Structures and Facilities for Model Definitions.

Nicolas Le Novère , Michael Hucka , Sven Sahle , Andreas Dräger
Journal of Integrative Bioinformatics 12 ( 2) 271 -271

12
2015
Recent software and services to support the SBML community

Michael Hucka , Andreas Dräger , Frank T. Bergmann , Nicolas Rodriguez
F1000Research 5

2016
Parameter Estimation, Metabolic Network Modeling

Hannes Planatscher , Andreas Dräger
Springer

1
2013
A Web-based Visual Analytics Application for Biological Networks

Cora Weigert , Andreas Dräger , Miriam Hoene , Rainer Lehmann
EuroVis (Posters) 41 -43

2020
First Genome-Scale Metabolic Model of Dolosigranulum pigrum Confirms Multiple Auxotrophies.

Andreas Dräger , Alina Renz , Lina Widerspick
Metabolites 11 ( 4) 232

6
2021
Harmonizing semantic annotations for computational models in biology

Maxwell Lewis Neal , Matthias König , David Nickerson , Göksel Mısırlı
Briefings in Bioinformatics 20 ( 2) 540 -550

22
2019
ModuleMaster: a new tool to decipher transcriptional regulatory networks.

Clemens Wrzodek , Adrian Schröder , Andreas Dräger , Dierk Wanke
BioSystems 99 ( 1) 79 -81

13
2010
Systems biology definition of the core proteome of metabolism and expression is consistent with high-throughput data

Laurence Yang , Justin Tan , Edward J. O’Brien , Jonathan M. Monk
Proceedings of the National Academy of Sciences of the United States of America 112 ( 34) 10810 -10815

34
2015
ProDGe: investigating protein-protein interactions at the domain level

Finja Büchel , Clemens Wrzodek , Florian Mittag , Andreas Dräger
Nature Precedings

2011
JSBML: a flexible and entirely Java-based library for working with SBML

Akiya Jouraku , Nicolas Le Novère , Andreas Zell , Michael Hucka
Nature Precedings

5
2011
217
2020
Overview: Standards for Modeling in Systems Medicine

Andreas Dräger , Dagmar Waltemath
Academic Press 345 -353

2020
SBMLSimulator: A Java Tool for Model Simulation and Parameter Estimation in Systems Biology

Alexander Dörr , Roland Keller , Andreas Zell , Andreas Dräger
Computation (Basel, Switzerland) 2 ( 4) 246 -257

10
2014
Recon3D enables a three-dimensional view of gene variation in human metabolism.

Elizabeth Brunk , Swagatika Sahoo , Daniel C Zielinski , Ali Altunkaya
Nature Biotechnology 36 ( 3) 272 -281

453
2018
1
2020
ZBIT Bioinformatics Toolbox: A Web-Platform for Systems Biology and Expression Data Analysis

Michael Römer , Johannes Eichner , Andreas Dräger , Clemens Wrzodek
PLOS ONE 11 ( 2) e0149263

7
2016