The Cancer Genome Atlas Pan-Cancer analysis project

Zhenlin Ju , Dong-Yeon Cho , Peter Waltman , Stephen C Benz
Nature

1,039
2013
The genetic landscape of high-risk neuroblastoma

Yael P Mosse , Yael P Mosse , Chandra Sekhar Pedamallu , Chandra Sekhar Pedamallu
PMC

2013
An exact method to compute a $p$-value for the beyond-pairwise correlations among cancer gene mutations

Jaegil Kim , Gad Getz , Yosef Maruvka , Michal Lawrence
arXiv: Quantitative Methods

2015
The Molecular Taxonomy of Primary Prostate Cancer

Guido Sauter , Christopher E. Barbieri , Saianand Balu , Simone Chevalier
PMC

3
2015
The Integrated Genomic Landscape of Thymic Epithelial Tumors

Pavana Anur , Andrew D. Cherniack , Mike McLellan , Rehan Akbani
Publisher

2018
Genetically-Defined Diffuse Large B-Cell Lymphoma Subsets Arise By Distinct Pathogenetic Mechanisms and Predict Outcome

Paul van Hummelen , James R. Cerhan , Scott J. Rodig , Amaro Taylor-Weiner
Blood 130 38 -38

2017
Comprehensive Characterization of Cancer Driver Genes and Mutations (vol 173, 371.e1, 2018)

Rachel Karchin , Adam Godzik , Eduard Porta-Pardo , David Tamborero
Cell 174 ( 4)

2
2018
Genomic predictors of recurrence (R) or progression (P) in high grade T1 (HGT1) non-muscle invasive (NMI) bladder cancer.

Joaquim Bellmunt , Jaegil Kim , Stephanie A. Mullane , Brendan Reardon
Journal of Clinical Oncology 34 4539 -4539

2016
Genomic landscape of micropapillary nonmuscle-invasive bladder cancer.

Brendan Reardon , Stephanie A. Mullane , Jaegil Kim , Gad Getz
Journal of Clinical Oncology 34

2016
Comprehensive Genomic Analysis of Primary Mediastinal B-Cell Lymphoma

Bjoern Chapuy , Chip Stewart , Andrew Dunford , Jaegil Kim
Blood 132 1564 -1564

3
2018
Comprehensive Genomic Analysis of Flow-Sorted Hodgkin Reed Sternberg Cells Reveals Additional Genetic Bases of Immune Evasion

Kirsty Wienand , Bjoern Chapuy , Chip Stewart , Andrew Dunford
Blood 132 1559 -1559

2
2018
Comprehensive Analyses of Genetic Features Identify Coordinate Signatures in Diffuse Large B-Cell Lymphoma

Bjoern Chapuy , Andrew J Dunford , Chip Stewart , Atanas Kamburov
Blood 126 ( 23) 3922 -3922

2015
Whole Exome Sequencing Identifies TSC1/TSC2 Biallelic Loss as the Primary and Sufficient Driver Event for Renal Angiomyolipoma Development

Krinio Giannikou , Izabela A. Malinowska , Trevor J. Pugh , Rachel Yan
PLOS Genetics 12 ( 8)

50
2016
Abstract 5902: Integrative genomic analysis of checkpoint blockade in lung cancer: A multi-institution SU2C collaborative

Monica Arniella , Arvind Ravi , Chip Stewart , Sam Freeman
Cancer Research 80 5902 -5902

2020
A comprehensive analysis of RNA sequences reveals macroscopic somatic clonal expansion across normal tissues

Jonna Grimsby , Ruslana Frazer , Hailei Zhang , Nicholas J. Haradhvala
bioRxiv 416339

6
2018
Abstract 2449: Transcriptome and whole-genome sequencing analysis of a novel murine model of chronic lymphocytic leukemia

Lili Wang , Jing Sun , Amaro Taylor-Weiner , Jaegil Kim
Cancer Research 77 2449 -2449

2017
Abstract 987: Comprehensive characterization of urothelial bladder cancer: a TCGA Project update

John N. Weinstein , Jaegil Kim , Chad J. Creighton , Rehan Akbani
Cancer Research 74 987 -987

2014
Abstract LB-231: Identifying cancer-related processes in normal tissues via RNA-seq

Keren Yizhak , Jaegil Kim , Francois Aguet , Julian Hess
Cancer Research 77

1
2017