引用次数
引用: 4,075
H-指数: 26
I10-指数 : 44
出版物: 89
Acute kidney injury leading to CKD is associated with a persistence of metabolic dysfunction and hypertriglyceridemia.
Adil Mardinoglu , Adil Mardinoglu , Saeed Shoaie , Saeed Shoaie
iScience 24 ( 2) 102046 -102046
2021
Systematic analysis of gut microbiome reveals the role of bacterial folate and homocysteine metabolism in Parkinson's disease.
Dorines Rosario , Gholamreza Bidkhori , Sunjae Lee , Janis Bedarf
Cell Reports 34 ( 9) 108807 -108807
2021
Global and temporal state of the human gut microbiome in health and disease
Saeed Shoaie , Sunjae Lee , Mathieu Almeida , Gholamreza Bidkhori
2021
Comparative Genomics Analysis of Keratin-Degrading Chryseobacterium Species Reveals Their Keratinolytic Potential for Secondary Metabolite Production.
Rodrigo Ledesma-Amaro , Søren J. Sørensen , Saeed Shoaie , Samuel Jacquiod
Microorganisms 9 ( 5) 1042
2021
Combined Metabolic Activators Reduces Liver Fat in Nonalcoholic Fatty Liver Disease Patients
Mathias Uhlen , Claudia Fredolini , Adil Mardinoglu , Jochen Schwenk
medRxiv
2021
Using systems biology approaches to elucidate cause and effect in host-microbiome interactions
Elizabeth A. Witherden , David L. Moyes , Kenneth D. Bruce , S. Dusko Ehrlich
Current Opinion in Systems Biology 3 141 -146
9
2017
Dynamic 13C-labeling experiments prove important differences in protein turnover rate between two Saccharomyces cerevisiae strains.
Kuk-Ki Hong , Jin Hou , Saeed Shoaie , Jens Nielsen
Fems Yeast Research 12 ( 7) 741 -747
15
2012
Elucidating the interactions between the human gut microbiota and its host through metabolic modeling.
Saeed Shoaie , Jens Nielsen
Frontiers in Genetics 5 86 -86
81
2014
Identifying anti-growth factors for human cancer cell lines through genome-scale metabolic modeling
Pouyan Ghaffari , Adil Mardinoglu , Anna Asplund , Saeed Shoaie
Scientific Reports 5 ( 1) 8183 -8183
45
2015
Combined metabolic cofactor supplementation accelerates recovery in mild-to-moderate COVID-19
Ozlem Altay , Hong Yang , Mehtap Aydin , Gizem Alkurt
medRxiv
4
2020
The Intestine Harbors Functionally Distinct Homeostatic Tissue-Resident and Inflammatory Th17 Cells.
Sara Omenetti , Claudio Bussi , Amina Metidji , Andrea Iseppon
Immunity 51 ( 1) 77
191
2019
Systems Biology: A Multi-Omics Integration Approach to Metabolism and the Microbiome
Jang Won Son , Saeed Shoaie , Sunjae Lee
Endocrinology and Metabolism 35 ( 3) 507 -514
7
2020
Challenges in modeling the human gut microbiome
Parizad Babaei , Saeed Shoaie , Boyang Ji , Jens Nielsen
Nature Biotechnology 36 ( 8) 682 -686
13
2018
Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome
Nicholson JK Shoaie S , Ghaffari P , Kovatcheva-Datchary P , Mardinoglu A
Cell Metabolism 22 ( 2) 320 -331
341
2015
Compositional and functional differences of the mucosal microbiota along the intestine of healthy individuals.
Stefania Vaga , Sunjae Lee , Boyang Ji , Anna Andreasson
Scientific Reports 10 ( 1) 1 -12
58
2020
A systems biology approach for studying neurodegenerative diseases
Simon Lam , Abdulahad Bayraktar , Cheng Zhang , Hasan Turkez
Drug Discovery Today 25 ( 7) 1146 -1159
3
2020
Disease, Drugs and Dysbiosis: Understanding Microbial Signatures in Metabolic Disease and Medical Interventions.
Ceri Proffitt , Gholamreza Bidkhori , David Moyes , Saeed Shoaie
Microorganisms 8 ( 9) 1381
3
2020
The Human Mucosal Mycobiome and Fungal Community Interactions.
Elizabeth A. Witherden , Saeed Shoaie , Rebecca A. Hall , David L. Moyes
Journal of Fungi 3 ( 4) 56
42
2017
The gut microbiota modulates host amino acid and glutathione metabolism in mice
Adil Mardinoglu , Saeed Shoaie , Mattias Bergentall , Pouyan Ghaffari
Molecular Systems Biology 11 ( 10) 834 -834
303
2015
Systems Biology Approaches to Understand the Host-Microbiome Interactions in Neurodegenerative Diseases.
Dorines Rosario , Jan Boren , Mathias Uhlen , Gordon Proctor
Frontiers in Neuroscience 14 716
10
2020