Characterization of the Survival Influential Genes in Carcinogenesis.

Divya Sahu , Chen-Ching Lin , Yu-Lin Chang , Yin-Chen Lin
International Journal of Molecular Sciences 22 ( 9) 4384

2021
Regulatory feedback loops bridge the human gene regulatory network and regulate carcinogenesis.

Yun-Ru Chen , Hsuan-Cheng Huang , Chen-Ching Lin
Briefings in Bioinformatics 20 ( 3) 976 -984

3
2019
Identification of 14-3-3β in human gastric cancer cells and its potency as a diagnostic and prognostic biomarker

Chien-Wei Tseng , Jyh-Chin Yang , Chiung-Nien Chen , Hsuan-Cheng Huang
PROTEOMICS 11 ( 12) 2423 -2439

35
2011
Link Clustering Reveals Structural Characteristics and Biological Contexts in Signed Molecular Networks

Chen-Ching Lin , Chia-Hsien Lee , Chiou-Shann Fuh , Hsueh-Fen Juan
PLoS ONE 8 ( 6) e67089

13
2013
Functional Evolution of Cardiac MicroRNAs in Heart Development and Functions

Chen-Ching Lin , Yao-Ming Chang , Cheng-Tsung Pan , Chien-Chang Chen
Molecular Biology and Evolution 31 ( 10) 2722 -2734

15
2014
Studying Tumorigenesis through Network Evolution and Somatic Mutational Perturbations in the Cancer Interactome

Feixiong Cheng , Peilin Jia , Quan Wang , Chen-Ching Lin
Molecular Biology and Evolution 31 ( 8) 2156 -2169

66
2014
Regulation rewiring analysis reveals mutual regulation between STAT1 and miR-155-5p in tumor immunosurveillance in seven major cancers

Chen-Ching Lin , Wei Jiang , Ramkrishna Mitra , Feixiong Cheng
Scientific Reports 5 ( 1) 12063 -12063

17
2015
Differential MicroRNA Regulation Correlates with Alternative Polyadenylation Pattern between Breast Cancer and Normal Cells

Hao-Han Liaw , Chen-Ching Lin , Hsueh-Fen Juan , Hsuan-Cheng Huang
PLOS ONE 8 ( 2)

22
2013
Mirin: Identifying MicroRNA Regulatory Modules in Protein- Protein Interaction Networks

Ken-Chi Yang , Chia-Lang Hsu , Chen-Ching Lin , Hsueh-Fen Juan
Bioinformatics 30 ( 17) 2527 -2528

6
2014
MicroRNA-Regulated Protein-Protein Interaction Networks and Their Functions in Breast Cancer

Chia-Hsien Lee , Wen-Hong Kuo , Chen-Ching Lin , Yen-Jen Oyang
International Journal of Molecular Sciences 14 ( 6) 11560 -11606

68
2013
76
2012
A Gene Gravity Model for the Evolution of Cancer Genomes: A Study of 3,000 Cancer Genomes across 9 Cancer Types

Feixiong Cheng , Chuang Liu , Chen-Ching Lin , Junfei Zhao
PLOS Computational Biology 11 ( 9) e1004497

49
2015
Reduced lipolysis in lipoma phenocopies lipid accumulation in obesity.

Diana Le Duc , Chen-Ching Lin , Yulia Popkova , Zuqin Yang
International Journal of Obesity 45 ( 3) 565 -576

2
2021
A cross-cancer differential co-expression network reveals microRNA-regulated oncogenic functional modules.

Chen-Ching Lin , Ramkrishna Mitra , Feixiong Cheng , Zhongming Zhao
Molecular BioSystems 11 ( 12) 3244 -3252

7
2015
Dynamic functional modules in co-expressed protein interaction networks of dilated cardiomyopathy

Chen-Ching Lin , Jen-Tsung Hsiang , Chia-Yi Wu , Yen-Jen Oyang
BMC Systems Biology 4 ( 1) 138 -138

43
2010
Integrative network analysis reveals active microRNAs and their functions in gastric cancer

Chien-Wei Tseng , Chen-Ching Lin , Chiung-Nien Chen , Hsuan-Cheng Huang
BMC Systems Biology 5 ( 1) 99 -99

68
2011
Crosstalk between transcription factors and microRNAs in human protein interaction network.

Chen-Ching Lin , Ya-Jen Chen , Cho-Yi Chen , Yen-Jen Oyang
BMC Systems Biology 6 ( 1) 18 -18

51
2012
Dynamic protein interaction modules in human hepatocellular carcinoma progression.

Hui Yu , Chen-Ching Lin , Yuan-Yuan Li , Zhongming Zhao
BMC Systems Biology 7 ( 5) 1 -13

21
2013
20
2015