OpenMP-Accelerated Dynamic Functional Connectivity Analysis on Multicore Computer

Devrim Akgun , John E Esquivel , Ünal Mete , Mutlu
11th Midsouth Computational Biology and Bioinformatics Society Conference (MCBIOS)

2014
Enhancing Precision in Multiple Sclerosis Lesion Segmentation: A U-Net Based Machine Learning Approach with Data Augmentation

Oezdemir Cetin , Berkay Canel , Gamze Dogali , Unal 'Zak' Sakoglu
Available at SSRN 4637911

2023
A Graphical Processing Unit Supported Neuroimaging Software in JAVA

M Mete , H Ankam , Ü Sakoğlu
10th Midsouth Computational Biology and Bioinformatics Society Conference (MCBIOS)

2013
Differential sensitivity of GLM and MVPA approaches to the identification of cortical reinstatement effects in memory retrieval

TH Wang , Ü Sakoğlu , MD Rugg
Society for Neuroscience Annual Meeting, October 2012, New Orleans, LA.

2012
Negative subsequent memory effects are accompanied by increased functional connectivity within the default-mode network

Ü Sakoğlu , M de Chastelaine , MD Rugg
Cognitive Neuroscience Annual Meeting, April 2012, Chicago, IL.

2012
Cortical reinstatement of auditory and visually presented contextual information as indexed by multi-voxel pattern classification

Tracy H Wang , Jeffrey J Johnson , Ü Sakoğlu , Lauren Gottlieb
Cognitive Neuroscience Annual Meeting, April 2011, San Francisco, CA

2011
Brain Networks Toolbox: Software for functional connectivity analysis based on Small World Network Theory

D-I Kim , Ü Sakoğlu
European Society for Magnetic Resonance in Medicine and Biology Annual Meeting, October 2009, Antalya, Turkey

2009
Software package to calculate permeability based on Patlak method

O Cetin , Ü Sakoğlu , R Sood
European Society for Magnetic Resonance in Medicine and Biology Annual Meeting, October 2008, Valencia, Spain 988 -988

2008
Application of MRI in the Development of a Preclinical Model of Cryptococcal Meningoencephalitis (CNME)

Ü Sakoğlu , RR Sood , M Pai
International Society of Magnetic Resonance in Medicine Annual Meeting, May 2008, Toronto, ON

2008
EEG-based emotion recognition using tunable Q wavelet transform and rotation forest ensemble classifier

Unal Sakoglu , Turker Tuncer , Sengul Dogan , Abdulhamit Subasi
Biomedical Signal Processing and Control 68 102648

53
2021
An entropy-based evaluation method for knowledge bases of medical information systems

Christian F. Hempelmann , Unal Sakoglu , Varadraj P. Gurupur , Seetaramaraju Jampana
Expert Systems With Applications 46 262 -273

28
2016
Normobaric hyperoxia inhibits NADPH oxidase‐mediated matrix metalloproteinase‐9 induction in cerebral microvessels in experimental stroke

Wenlan Liu , Rohit Sood , Qingchuan Chen , Unal Sakoglu
Journal of Neurochemistry 107 ( 5) 1196 -1205

86
2008
Characterization of BBB permeability in a preclinical model of cryptococcal meningoencephalitis using magnetic resonance imaging

Manjunath P Pai , Unal Sakoglu , Steven L Peterson , C Richard Lyons
Journal of Cerebral Blood Flow and Metabolism 29 ( 3) 545 -553

9
2009
An Adaptive Space-Filling Curve Trajectory for Ordering 3D Datasets to 1D: Application to Brain Magnetic Resonance Imaging Data for Classification

Unal Sakoglu , Lohit Bhupati , Nazanin Beheshti , Nikolaos Tsekos
international conference on computational science 12139 635 -646

3
2020
Multiple sclerosis lesion detection in multimodal MRI using simple clustering-based segmentation and classification

Ozdemir Cetin , Volkan Seymen , Unal Sakoglu
Informatics in Medicine Unlocked 20 100409

1
2020
A Data-Driven Investigation of Gray Matter-Function Correlations in Schizophrenia during a Working Memory Task.

Andrew M. Michael , Margaret D. King , Stefan Ehrlich , Godfrey Pearlson
Frontiers in Human Neuroscience 5 71 -71

19
2011
Facial Expression Recognition: Utilizing Digital Image Processing, Deep Learning, and High-Performance Computing

Francisco Reveriano , Unal Sakoglu , Jiang Lu
Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning) 68

2019
Successful classification of cocaine dependence using brain imaging: a generalizable machine learning approach

Mutlu Mete , Unal Sakoglu , Jeffrey S. Spence , Michael D. Devous
BMC Bioinformatics 17 ( 13) 357 -357

12
2016
Semantic requirements sharing approach to develop software systems using concept maps and information entropy: A Personal Health Information System example

Varadraj P. Gurupur , Unal Sakoglu , G. Pankaj Jain , U. John Tanik
Advances in Engineering Software 70 25 -35

20
2014
GPU-accelerated dynamic functional connectivity analysis for functional MRI data using OpenCL

Devrim Akgun , Unal Sakoglu , Mutlu Mete , Johnny Esquivel
electro information technology 479 -484

3
2014