Reduced Oct4 Expression Directs a Robust Pluripotent State with Distinct Signaling Activity and Increased Enhancer Occupancy by Oct4 and Nanog

Violetta Karwacki-Neisius , Jonathan Göke , Rodrigo Osorno , Florian Halbritter
Cell Stem Cell 12 ( 5) 531 -545

150
2013
Cumulative Signal Transmission in Nonlinear Reaction-Diffusion

DA Oyarzún , F López-Caamal , MR Garcıa , RH Middleton

2013
A model of RNA repair to study antibiotic tolerance

HJ Hindley , M El Karoui , AY Weiße

Detecting carbapenemase-producing Enterobacterales (CPE): an evaluation of an enhanced CPE infection control and screening programme in acute care.

Jonathan A Otter , Siddharth Mookerjee , Frances Davies , Frances Bolt
Journal of Antimicrobial Chemotherapy 75 ( 9) 2670 -2676

5
2020
Quantifying uncertainty, variability and likelihood for ordinary differential equation models.

Wilhelm Huisinga , Andrea Y Weiße , Richard H Middleton
BMC Systems Biology 4 ( 1) 144 -144

15
2010
Prediction of hospital-onset COVID-19 infections using dynamic networks of patient contact: an international retrospective cohort study

Ashleigh Myall , James R Price , Robert L Peach , Mohamed Abbas
The Lancet Digital Health 4 ( 8) e573 -e583

11
2022
Informing antimicrobial management in the context of COVID-19: understanding the longitudinal dynamics of C-reactive protein and procalcitonin

Damien K Ming , Ashleigh C Myall , Bernarnd Hernandez , Andrea Y Weiße
BMC Infectious Diseases 21 ( 1) 1 -7

22
2021
From Proteins to Ligands: Decoding Deep Learning Methods for Binding Affinity Prediction

Rohan Gorantla , Alzbeta Kubincova , Andrea Y Weiße , Antonia SJS Mey
Journal of Chemical Information and Modeling

7
2023
Network memory in the movement of hospital patients carrying drug-resistant bacteria

Ashleigh C Myall , Robert L Peach , Andrea Y Weiße , Frances Davies
arXiv preprint arXiv:2009.14480

5
2020
1
2021
Retention of gene products in syncytial spermatids promotes non-Mendelian inheritance as revealed by the t complex responder

Nathalie Véron , Hermann Bauer , Andrea Y Weiße , Gerhild Lüder
Genes & development 23 ( 23) 2705 -2710

56
2009
Prediction of cellular burden with host–circuit models

Evangelos-Marios Nikolados , Andrea Y Weiße , Diego A Oyarzún
Synthetic Gene Circuits: Methods and Protocols 267 -291

10
2021
Chance and memory

Theodore J Perkins , Andrea Y Weiße , Peter S Swain
CRC Press 51 -72

3
2013
Global sensitivity analysis of ODEs via the solution of the associated Fokker-Planck equation

Andrea Y Weiße , Wilhelm Huisinga
Proceedings of the 6th Workshop on Computation of Biochemical Pathways and Genetic Networks 43 -52

2010
Network memory in the movement of hospital patients carrying antimicrobial-resistant bacteria

Frances Davies , Andrea Y. Weiße , Andrea Y. Weiße , Mauricio Barahona
Applied Network Science 6 ( 1) 34

2021
Growth defects and loss-of-function in synthetic gene circuits

Evangelos-Marios Nikolados , Andrea Y. Weiße , Francesca Ceroni , Diego A. Oyarzún
ACS Synthetic Biology 8 ( 6) 1231 -1240

29
2019
Sources, propagation and consequences of stochasticity in cellular growth.

Philipp Thomas , Guillaume Terradot , Vincent Danos , Andrea Y. Weiße
Nature Communications 9 ( 1) 4528

38
2018
Cumulative Signal Transmission in Nonlinear Reaction-Diffusion Networks

Diego A. Oyarzún , Fernando López-Caamal , Míriam R. García , Richard H. Middleton
PLoS ONE 8 ( 5) e62834

2
2013
Error-controlled global sensitivity analysis of ordinary differential equations

Andrea Y. Weiße , Wilhelm Huisinga
Journal of Computational Physics 230 ( 17) 6824 -6842

3
2011