A deep learning phenotyping method for genetic analysis of 3D micro-CT data

Arman Karshenas , Tyler Philip Linderoth , Richard Zatha , Bosco RusuWa
bioRxiv 2023.08. 24.554725 -2023.08. 24.554725

2023
Evolution and Diversification of the Aposematic Poison Frog, Oophaga pumilio, in Bocas del Toro

Diana Aguilar-Gomez , Layla Freeborn , Lin Yuan , Lydia L Smith
bioRxiv 2024.08. 02.606438 -2024.08. 02.606438

2024
Spatio-temporal population genetic structure and mating system of red king crab (Paralithodes camtschaticus) in Alaska

S.C. Vulstek , T.P. Linderoth , W.D. Templin , J.R. Guyon
Journal of Crustacean Biology 33 ( 5) 691 -701

6
2013
Temporal genomic contrasts reveal rapid evolutionary responses in an alpine mammal during recent climate change.

Ke Bi , Tyler Linderoth , Sonal Singhal , Dan Vanderpool
PLOS Genetics 15 ( 5)

24
2019
Quantifying Population Genetic Differentiation from Next-Generation Sequencing Data

Matteo Fumagalli , Filipe G. Vieira , Thorfinn Sand Korneliussen , Tyler Linderoth
Genetics 195 ( 3) 979 -992

203
2013
ngsTools: methods for population genetics analyses from next-generation sequencing data

Matteo Fumagalli , Filipe G. Vieira , Tyler Linderoth , Rasmus Nielsen
Bioinformatics 30 ( 10) 1486 -1487

170
2014
Evolutionary Genomics at the Human-Environment Interface in Africa.

Arox Kamng’ona , Hannes Svardal , Bosco Rusuwa , Tyler Linderoth
Molecular Biology and Evolution 37 ( 10) 3076 -3080

2020
Multiple Selection Signatures in Farmed Atlantic Salmon Adapted to Different Environments Across Hemispheres.

María Eugenia López , Tyler Linderoth , Ashie Norris , Jean Paul Lhorente
Frontiers in Genetics 10 901

9
2019
Unlocking the vault: next-generation museum population genomics.

Ke Bi , Tyler Linderoth , Dan Vanderpool , Jeffrey M. Good
Molecular Ecology 22 ( 24) 6018 -6032

243
2013
Genome-wide signatures of complex introgression and adaptive evolution in the big cats

Henrique V. Figueiró , Gang Li , Fernanda J. Trindade , Juliana Assis
Science Advances 3 ( 7) 13

115
2017
216
2012
Data from: Unlocking the vault: next generation museum population genomics

Ke Bi , Tyler Linderoth , Dan Vanderpool , Jeffrey M Good
Dryad

2013
Differential use of multiple genetic sex determination systems in divergent ecomorphs of an African crater lake cichlid

Hannah Munby , Tyler Linderoth , Bettina Fischer , Mingliu Du
BioRxiv 2021.08. 05.455235 -2021.08. 05.455235

13
2021
Genomic takeover by transposable elements in the strawberry poison frog

Rebekah L Rogers , Long Zhou , Chong Chu , Roberto Márquez
Molecular Biology and Evolution 35 ( 12) 2913 -2927

68
2018
Genetic basis of aposematic coloration in a mimetic radiation of poison frogs

Tyler Linderoth , Diana Aguilar-Gómez , Emily White , Evan Twomey
bioRxiv 2023.04. 20.537757 -2023.04. 20.537757

1
2023
A holobiont view of island biogeography: Unravelling patterns driving the nascent diversification of a Hawaiian spider and its microbial associates

Ellie E Armstrong , Benoît Perez‐Lamarque , Ke Bi , Cerise Chen
Molecular Ecology 31 ( 4) 1299 -1316

10
2022
Transcriptomics of a developmental series provides insights into color and pattern development in a polytypic species

Adam MM Stuckert , Tyler Linderoth , Matthew MacManes , Rasmus Nielsen
2018 ESA Annual Meeting (August 5--10)

2018
Differential gene expression and gene variants drive color and pattern development in divergent color

Adam MM Stuckert , Tyler Linderoth , Matthew D MacManes , Kyle Summers