On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

Leonid Peshkin , Martin Wühr , Esther Pearl , Wilhelm Haas
Developmental Cell 35 ( 3) 383 -394

128
2015
The Critical Discussion Group: Fostering Personal and Scientific Growth

Allon M. Klein , Laura Lande-Diner
Molecular Cell 44 ( 2) 167 -169

3
2011
A Single-Cell Transcriptomic Map of the Human and Mouse Pancreas Reveals Inter- and Intra-cell Population Structure.

Maayan Baron , Adrian Veres , Samuel L. Wolock , Aubrey L. Faust
Cell systems 3 ( 4) 346 -360

944
2016
Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells

Allon M. Klein , Linas Mazutis , Ilke Akartuna , Naren Tallapragada
Cell 161 ( 5) 1187 -1201

2,832
2015
Proteomics of phosphorylation and protein dynamics during fertilization and meiotic exit in the Xenopus egg

Marc Presler , Elizabeth Van Itallie , Rayan Klein , Allon Moshe
Proc Natl Acad Sci U S A

49
2017
Fundamental limits on dynamic inference from single cell snapshots [preprint]

Samuel Wolock , Allon M. Klein , Caleb Weinreb , Betsabeh K. Tusi

9
2017
Emergence of the erythroid lineage from multipotent hematopoiesis [preprint]

Ari Waisman , Samuel L. Wolock , Allon M. Klein , Jun R. Huh

1
2018
Inflation-collapse dynamics drive patterning and morphogenesis in intestinal organoids.

Naren P. Tallapragada , Ophir D. Klein , Tomas Wald , Allon M. Klein
Cell Stem Cell

30
2021
Lineage tracing on transcriptional landscapes links state to fate during differentiation

Caleb Weinreb , Alejo Rodriguez-Fraticelli , Fernando D. Camargo , Allon M. Klein
Science 367 ( 6479)

350
2020
Mouse Germ Line Stem Cells Undergo Rapid and Stochastic Turnover

Allon M. Klein , Toshinori Nakagawa , Rie Ichikawa , Shosei Yoshida
Cell Stem Cell 7 ( 2) 214 -224

201
2010
Single-cell analysis of experience-dependent transcriptomic states in the mouse visual cortex.

Sinisa Hrvatin , Daniel R. Hochbaum , M. Aurel Nagy , Marcelo Cicconet
Nature Neuroscience 21 ( 1) 120 -129

331
2018
Ngn3+ endocrine progenitor cells control the fate and morphogenesis of pancreatic ductal epithelium

Judith Magenheim , Allon M. Klein , Ben Z. Stanger , Ruth Ashery-Padan
Developmental Biology 359 ( 1) 26 -36

62
2011
Patterning as a signature of human epidermal stem cell regulation.

Allon M. Klein , Varvara Nikolaidou-Neokosmidou , David P. Doupé , Philip H. Jones
Journal of the Royal Society Interface 8 ( 65) 1815 -1824

14
2011
Single-Cell Transcriptomics of Human and Mouse Lung Cancers Reveals Conserved Myeloid Populations across Individuals and Species.

Rapolas Zilionis , Camilla Engblom , Christina Pfirschke , Virginia Savova
Immunity 50 ( 5) 1317

737
2019
A single type of progenitor cell maintains normal epidermis

Elizabeth Clayton , David P. Doupé , Allon M. Klein , Douglas J. Winton
Nature 446 ( 7132) 185 -189

702
2007
Intestinal crypt homeostasis results from neutral competition between symmetrically dividing Lgr5 stem cells

Hugo J. Snippert , Laurens G. van der Flier , Toshiro Sato , Johan H. van Es
Cell 143 ( 1) 134 -144

1,865
2010
Lineage tracing meets single-cell omics: opportunities and challenges.

Allon M. Klein , Daniel E. Wagner
Nature Reviews Genetics 21 ( 7) 410 -427

269
2020
The ordered architecture of murine ear epidermis is maintained by progenitor cells with random fate.

David P. Doupé , Allon M. Klein , Benjamin D. Simons , Philip H. Jones
Developmental Cell 18 ( 2) 317 -323

256
2010
Clonal analysis of lineage fate in native haematopoiesis

Alejo E. Rodriguez-Fraticelli , Samuel L. Wolock , Caleb S. Weinreb , Riccardo Panero
Nature 553 ( 7687) 212 -216

426
2018
Population snapshots predict early haematopoietic and erythroid hierarchies

Betsabeh Khoramian Tusi , Samuel L. Wolock , Caleb Weinreb , Yung Hwang
Nature 555 ( 7694) 54 -60

261
2018