引用次数
引用: 1,035
H-指数: 18
I10-指数 : 24
出版物: 39
Large-scale identification of coevolution signals across homo-oligomeric protein interfaces by direct coupling analysis
Shalini John Lovis* , Guido Uguzzonia* , Francesco Oteria , Alexander Schug
PNAS
116
2017
Modeling and simulation of DNA nanocages - saxs and MD
Francesco Oteri , Alessandro Desideri , Cassio Alves , Federico Iacovelli
Resumos
2013
Influence of the Single-Strand linker to stability of DNA nano-cages
Francesco Oteri , Alessandro Desideri , Cássio Alves , Federico Iacovelli
Resumo
2015
MyCLADE: a multi-source domain annotation server for sequence functional exploration
Francesco Oteri , Alessandra Carbone , Riccardo Vicedomini , Clémence Blachon
Nucleic Acids Research
2021
Influence of the single-strand linker composition on the structural/dynamical properties of a truncated octahedral DNA nano-cage family.
Federico Iacovelli , Cassio Alves , Mattia Falconi , Francesco Oteri
Biopolymers 101 ( 10) 992 -999
9
2014
ADP/ATP mitochondrial carrier MD simulations to shed light on the structural-dynamical events that, after an additional mutation, restore the function in a pathological single mutant.
Daniele Di Marino , Francesco Oteri , Blasco Morozzo della Rocca , Giovanni Chillemi
Journal of Structural Biology 172 ( 3) 225 -232
8
2010
Mapping multiple potential ATP binding sites on the matrix side of the bovine ADP/ATP carrier by the combined use of MD simulation and docking
Daniele Di Marino , Francesco Oteri , Blasco Morozzo della Rocca , Ilda D’Annessa
Journal of Molecular Modeling 18 ( 6) 2377 -2386
7
2012
Residues of Alpha Helix H3 Determine Distinctive Features of Transforming Growth Factor β3
Shahid M. Nayeem , Francesco Oteri , Marc Baaden , Shashank Deep
Journal of Physical Chemistry B 121 ( 22) 5483 -5498
5
2017
Effect of the charge distribution along the “ferritin-like” pores of the proteins from the Dps family on the iron incorporation process
Pierpaolo Ceci , Gisa Di Cecca , Mattia Falconi , Francesco Oteri
Journal of Biological Inorganic Chemistry 16 ( 6) 869 -880
15
2011
COVTree: Coevolution in OVerlapped sequences by Tree analysis server.
Elin Teppa , Diego J Zea , Francesco Oteri , Alessandra Carbone
Nucleic Acids Research 48
1
2020
Molecular Modeling of Hydrogenase Enzymes for Biofuel Cell Design
Francesco Oteri , Anne De Poulpiquet , Alexandre Ciaccafava , Elisabeth Loujou
Biophysical Journal 104 ( 2)
2013
The weak, fluctuating, dipole moment of membrane-bound hydrogenase from Aquifex aeolicus accounts for its adaptability to charged electrodes
Francesco Oteri , Alexandre Ciaccafava , Anne de Poulpiquet , Marc Baaden
Physical Chemistry Chemical Physics 16 ( 23) 11318 -11322
21
2014
Phylogenetic Reconstruction Based on Synteny Block and Gene Adjacencies
Gilles Fischer , Alessandra Carbone , Guénola Drillon , Raphaël Champeimont
Molecular Biology and Evolution 37 ( 9) 2747 -2762
22
2020
Molecular mechanism of statin-mediated LOX-1 inhibition
Siliva Biocca , Federico Iacovelli , Sara Matarazzo , Giulia Vindigni
Cell Cycle 14 ( 10) 1583 -1595
38
2015
Structural-dynamical investigation of the ZnuA histidine-rich loop: involvement in zinc management and transport
Mattia Falconi , Francesco Oteri , Francesco Di Palma , Saurabh Pandey
Journal of Computer-Aided Molecular Design 25 ( 2) 181 -194
12
2011
BIS2Analyzer: a server for co-evolution analysis of conserved protein families
Francesco Oteri , Francesca Nadalin , Raphaël Champeimont , Alessandra Carbone
Nucleic Acids Research 45
25
2017
Simulative Analysis of a Truncated Octahedral DNA Nanocage Family Indicates the Single-Stranded Thymidine Linkers as the Major Player for the Conformational Variability
Francesco Oteri , Mattia Falconi , Giovanni Chillemi , Felicie F. Andersen
Journal of Physical Chemistry C 115 ( 34) 16819 -16827
15
2011
Deciphering the Structural Properties That Confer Stability to a DNA Nanocage
Mattia Falconi , Francesco Oteri , Giovanni Chillemi , Felicie F. Andersen
ACS Nano 3 ( 7) 1813 -1822
22
2009
Structure of nanoscale truncated octahedral DNA cages: variation of single-stranded linker regions and influence on assembly yields
Cristiano Luis Pinto Oliveira , Sissel Juul , Hanne Lærke Jørgensen , Bjarne Knudsen
ACS Nano 4 ( 3) 1367 -1376
40
2010
Direct coevolutionary couplings reflect biophysical residue interactions in proteins
Alice Coucke , Guido Uguzzoni , Francesco Oteri , Simona Cocco
Journal of Chemical Physics 145 ( 17) 174102 -174102
16
2016