The open diffusion data derivatives, brain data upcycling via integrated publishing of derivatives and reproducible open cloud services

Ivo D Dinov Dinov , Franco Pestilli Pestilli , Daniel Bullock Bullock , Paolo Avesani Avesani
Scientific Data 6 ( 1) 69

30
2019
Galaxy Deployment on Heterogenous Hardware

Soichi Hayashi , Carrie Ganote

2014
Galaxy based BLAST submission to distributed national high throughput computing resources

Carrie Ganote , Sandra Gesing , Le-shin Wu , Elizabeth Prout

2
2013
RSV: OSG Fabric Monitoring and Interoperation with WLCG Monitoring Systems

Arvind Gopu , Rob Quick , Soichi Hayashi
Computing in High Energy and Nuclear Physics

2
2009
Building a Chemical-Protein Interactome on the Open Science Grid

Samy Meroueh , David Xu , Bo Wang , Rob E. Quick
2015 International Symposium on Grids and Clouds, ISGC 2015 024

2
2015
OSG PKI transition: Experiences and lessons learned

Jim Basney , Anthony Tiradani , Mine Altunay , Chander S. Sehgal
Proceedings of Science 007

2014
Galaxy based BLAST submission to Open Science Grid resources

Soichi Hayashi , Sandra GESING , Robert Quick , Scott TEIGE
Proceedings of International Symposium on Grids and Clouds (ISGC) 2014 — PoS(ISGC2014)

2014
Classifyber, a robust streamline-based linear classifier for white matter bundle segmentation

Giulia Bertò , Daniel Bullock , Pietro Astolfi , Soichi Hayashi
NeuroImage 224 117402

2
2021
GOC-TX: A Reliable Ticket Synchronization Application for the Open Science Grid

Soichi Hayashi , Arvind Gopu , Robert Quick
Journal of Physics: Conference Series 331 ( 8) 082013

3
2011
Open Science Grid (OSG) Ticket Synchronization: Keeping Your Home Field Advantage In A Distributed Environment

Kyle Gross , Soichi Hayashi , Scott Teige , Robert Quick
Journal of Physics: Conference Series 396 ( 6) 062009

1
2012
Scalable Quality Assurance for Neuroimaging (SQAN): automated quality control for medical imaging

Arvind Gopu , Michael D. Young , Andrea Avena-Koenigsberger , Raymond W. Perigo
Medical Imaging 2020: Imaging Informatics for Healthcare, Research, and Applications 11318 1131807

2020
Shape Analysis of White Matter Tracts via the Laplace-Beltrami Spectrum

Lindsey Kitchell , Daniel Bullock , Soichi Hayashi , Franco Pestilli
Shape in Medical Imaging 195 -206

3
2018
ImageX: new and improved image explorer for astronomical images and beyond

Soichi Hayashi , Arvind Gopu , Ralf Kotulla , Michael D. Young
Software and Cyberinfrastructure for Astronomy IV 9913

2016
Project APRED: a web-based data analytics platform for supporting community disaster resilience

Ike Obi , Logan J Paul , William Liao , Mariem Loukil
Journal of emergency management 21 ( 5) 399 -419

2023
DataLad: distributed system for joint management of code, data, and their relationship

Yaroslav Halchenko , Kyle Meyer , Benjamin Poldrack , Debanjum Solanky
Journal of Open Source Software 6 ( 63)

100
2021
brainlife. io: a decentralized and open-source cloud platform to support neuroscience research

Soichi Hayashi , Bradley A Caron , Anibal Sólon Heinsfeld , Sophia Vinci-Booher
Nature methods 1 -5

8
2024
Classifyber: for white matter bundle segmentation

Emanuele Olivetti , Daniel Bullock , Pietro Astolfi , Soichi Hayashi

Physiopy: A community-driven suite of tools for physiological recordings in neuroimaging

Katherine Louise Bottenhorn , Daniel Alcalà-Lopez , Apoorva Ayyagari , Molly G Bright

ezBIDS: Guided standardization of neuroimaging data interoperable with major data archives and platforms

Daniel Levitas , Soichi Hayashi , Sophia Vinci-Booher , Anibal Heinsfeld
Scientific data 11 ( 1) 179 -179

1
2024
A labeled Clinical-MRI dataset of Nigerian brains

Eberechi Wogu , Patrick Filima , Bradley Caron , Daniel Levitas
ArXiv

2023