Catching shufflons in the act: Using nanopore reads to study Bacteroides fragilis

Mark Blaxter , Marian Thomson , Mick Watson , Gary Blakely
F1000Research 4

1
2015
RNA-seq data from Teleogryllus oceanicus embryos of silent and singing morphs

Karim Gharbi , Mark Blaxter , Timothee Cezard , Sonia Pascoal
University of St Andrews

2019
SBfI RADseq of Teleogryllus oceanicus F3 cross between Daintree and Kailua flat-wing crickets

Karim Gharbi , Mark Blaxter , Timothee Cezard , Sonia Pascoal
Wageningen University

2019
The long reads ahead: de novo genome assembly using the MinION.

Carlos de Lannoy , Dick de Ridder , Judith Risse
F1000Research 6 1083 -1083

67
2017
poRe: an R package for the visualization and analysis of nanopore sequencing data.

Mick Watson , Marian Thomson , Judith Risse , Richard Talbot
Bioinformatics 31 ( 1) 114 -115

76
2015
Genomic Signatures of Historical Allopatry and Ecological Divergence in an Island Lizard.

Richard P. Brown , Steve Paterson , Judith Risse
Genome Biology and Evolution 8 ( 11) 3618 -3626

7
2016
poreTally: run and publish de novo nanopore assembler benchmarks

Carlos de Lannoy , Judith Risse , Dick de Ridder
Bioinformatics 35 ( 15) 2663 -2664

2
2019
A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data

Judith Risse , Marian Thomson , Sheila Patrick , Garry Blakely
GigaScience 4 ( 1) 60 -60

56
2015
Genetic mechanisms underlying increased microalgal thermotolerance, maximal growth rate, and yield on light following adaptive laboratory evolution

Robin Barten , Dirk-Jan M Van Workum , Emma de Bakker , Judith Risse
BMC biology 20 ( 1) 242 -242

10
2022
Profiling of MicroRNAs in the biofluids of livestock species

Jason Ioannidis , Judith Risse , F Xavier Donadeu
MicroRNA Protocols 65 -77

6
2018
Cap-snatching as a possible contributor to photosynthesis shut-off

Min Xu , Judith Risse , Richard Kormelink
Journal of General Virology 103 ( 8) 001763 -001763

1
2022
A supergene determines highly divergent male reproductive morphs in the ruff

Clemens Küpper , Michael Stocks , Judith E Risse , Natalie dos Remedios
Nature Genetics 48 ( 1) 79 -83

258
2016
Transcriptional regulation underlying the temperature response of embryonic development rate in the winter moth

Natalie E van Dis , Judith E Risse , Agata S Pijl , Roelof A Hut
Molecular Ecology 31 ( 22) 5795 -5812

2
2022
Two Thesauri for Identifying Enzymes and Metabolites in Text

Judith E Risse , Harm Nijveen , Paul E van der Vet
TEXT MINING FOR METABOLIC REACTION EXTRACTION FROM SCIENTIFIC LITERATURE 37 -37

Selfishness can be deadly: a recessive lethal inversion is maintained by meiotic drive in great tits

Vinicius H da Silva , Judith E Risse , Kees van Oers , Martijn FL Derks
Structural variants in the great tit genome and their effect on seasonal timing 97 -97

Field cricket genome reveals the footprint of recent, abrupt adaptation in the wild

Sonia Pascoal , Judith E Risse , Xiao Zhang , Mark Blaxter
Evolution Letters

36
2019
Data from: Opposing patterns of intraspecific and interspecific differentiation in sex chromosomes and autosomes

Peter A Moran , Sonia Pascoal , Timothee Cezard , Judith E Risse
University College Cork

2018