Pep Charusanti
机构: NNF Center for Biosustainability, Technical University of Denmark
主页: dtu.dk
每年引用次数
引用次数
引用: 7,069
H-指数: 21
I10-指数 : 25
出版物: 41
MS/MS networking guided analysis of molecule and gene cluster families
D. D. Nguyen , C.-H. Wu , W. J. Moree , A. Lamsa
Proceedings of the National Academy of Sciences of the United States of America 110 ( 28) 201303471
253
2013
Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments
J. M. Monk , P. Charusanti , R. K. Aziz , J. A. Lerman
Proceedings of the National Academy of Sciences of the United States of America 110 ( 50) 20338 -20343
280
2013
A Gapless, Unambiguous Genome Sequence of the Enterohemorrhagic Escherichia coli O157:H7 Strain EDL933
H. Latif , H. J. Li , P. Charusanti , B. O. Palsson
Genome Announcements 2 ( 4)
40
2014
An Experimentally Validated Genome-Scale Metabolic Reconstruction of Klebsiella pneumoniae MGH 78578, iYL1228
Y.-C. Liao , T.-W. Huang , F.-C. Chen , P. Charusanti
Journal of Bacteriology 193 ( 7) 1710 -1717
84
2011
Microbial regulatory and metabolic networks.
Byung-Kwan Cho , Pep Charusanti , Markus J. Herrgård , Bernhard ∅. Palsson
Current Opinion in Biotechnology 18 ( 4) 360 -364
26
2007
Capsule deletion via a λ-Red knockout system perturbs biofilm formation and fimbriae expression in Klebsiella pneumoniae MGH 78578.
Tzu-Wen Huang , Irene Lam , Hwan-You Chang , Shih-Feng Tsai
BMC Research Notes 7 ( 1) 13 -13
63
2014
Model-driven discovery of synergistic inhibitors against E. coli and S. enterica serovar Typhimurium targeting a novel synthetic lethal pair, aldA and prpC
Ramy K. Aziz , Valerie L. Khaw , Jonathan M. Monk , Elizabeth Brunk
Frontiers in Microbiology 6 958 -958
6
2015
Genetic Basis of Growth Adaptation of Escherichia coli after Deletion of pgi, a Major Metabolic Gene
Pep Charusanti , Tom M. Conrad , Eric M. Knight , Karthik Venkataraman
PLOS Genetics 6 ( 11)
114
2010
Exploiting Adaptive Laboratory Evolution of Streptomyces clavuligerus for Antibiotic Discovery and Overproduction
Yongxuan Su , William H. Gerwick , Bernhard O. Palsson , Pep Charusanti
PLoS ONE 7 ( 3) e33727
60
2012
Systems biology definition of the core proteome of metabolism and expression is consistent with high-throughput data
Laurence Yang , Justin Tan , Edward J. O’Brien , Jonathan M. Monk
Proceedings of the National Academy of Sciences of the United States of America 112 ( 34) 10810 -10815
34
2015
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
Mingxun Wang , Jeremy J Carver , Vanessa V Phelan , Laura M Sanchez
Nature Biotechnology 34 ( 8) 828 -837
2,378
2016
Programmable polyketide biosynthesis platform for production of aromatic compounds in yeast
Tadas Jakočiūnas , Andreas K Klitgaard , Eftychia Eva Kontou , Julie Bang Nielsen
Synthetic and Systems Biotechnology 5 ( 1) 11 -18
7
2020
Reconciling a Salmonella enterica metabolic model with experimental data confirms that overexpression of the glyoxylate shunt can rescue a lethal ppc deletion mutant.
Nicole L. Fong , Joshua A. Lerman , Irene Lam , Bernhard O. Palsson
Fems Microbiology Letters 342 ( 1) 62 -69
7
2013
The aldehyde dehydrogenase, AldA, is essential for L-1,2-propanediol utilization in laboratory-evolved Escherichia coli
Ramy K. Aziz , Jonathan M. Monk , Kathleen A. Andrews , Jenny Nhan
Microbiological Research 194 47 -52
1
2017
Metabolic engineering with systems biology tools to optimize production of prokaryotic secondary metabolites
Hyun Uk Kim , Pep Charusanti , Sang Yup Lee , Tilmann Weber
Natural Product Reports 33 ( 8) 933 -941
34
2016
Studying Salmonellae and Yersiniae Host–Pathogen Interactions Using Integrated ‘Omics and Modeling
Charles Ansong , Brooke L. Deatherage , Daniel Hyduke , Brian Schmidt
Current Topics in Microbiology and Immunology 363 21 -41
12
2012
Multiple-omic data analysis of Klebsiella pneumoniae MGH 78578 reveals its transcriptional architecture and regulatory features
Joo-Hyun Seo , Jay Hong , Donghyuk Kim , Byung-Kwan Cho
BMC Genomics 13 ( 1) 679 -679
25
2012
Systems biology-guided identification of synthetic lethal gene pairs and its potential use to discover antibiotic combinations.
Ramy K. Aziz , Jonathan M. Monk , Robert M. Lewis , Suh In Loh
Scientific Reports 5 ( 1) 16025 -16025
17
2015
An experimentally-supported genome-scale metabolic network reconstruction for Yersinia pestis CO92.
Pep Charusanti , Sadhana Chauhan , Kathleen McAteer , Joshua A Lerman
BMC Systems Biology 5 ( 1) 163 -163
30
2011
A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2
Ines Thiele , Daniel R Hyduke , Benjamin Steeb , Guy Fankam
BMC Systems Biology 5 ( 1) 8 -8
156
2011