Conrado Pedebos
机构: Postdoctoral Research Associate - Universidade Federal de Ciências da Saúde de Porto Alegre
每年引用次数
引用次数
引用: 354
H-指数: 12
I10-指数 : 14
出版物: 26
The hitchhiker's guide to the periplasm: Unexpected molecular interactions of polymyxin B1 in E. coli.
Conrado Pedebos , Alister Boags , Syma Khalid , Iain Peter Shand Smith
Structure 29 ( 5)
2021
Modifying the catalytic preference of alpha-amylase toward n-alkanes for bioremediation purposes using in silico strategies.
Conrado Pedebos , Bruno César Feltes , Márcio Dorn , Éderson Sales Moreira Pinto
Journal of Computational Chemistry
2021
Unrestrained Conformational Characterization of Stenocereus eruca Saponins in Aqueous and Nonaqueous Solvents
Conrado Pedebos , Laercio Pol-Fachin , Hugo Verli
Journal of Natural Products 75 ( 6) 1196 -1200
7
2012
Assessment of Structural Units Deletions in the Archaeal Oligosaccharyltransferase AglB
Conrado Pedebos , Hugo Verli
bioRxiv
2020
CoCo-MD: A Simple and Effective Method for the Enhanced Sampling of Conformational Space
Ardita Shkurti , Ioanna Danai Styliari , Vivek Balasubramanian , Iain Bethune
Journal of Chemical Theory and Computation 15 ( 4) 2587 -2596
5
2019
In silico Investigation of the PglB Active Site Reveals Transient Catalytic States and Octahedral Metal Ion Coordination
Conrado Pedebos , Pablo Ricardo Arantes , Guilherme Menegon Giesel , Hugo Verli
Glycobiology 25 ( 11) 1183 -1195
6
2015
The role of Zn2+, dimerization and N-glycosylation in the interaction of Auxin-Binding Protein 1 (ABP1) with different auxins
Cibele Tesser da Costa , Conrado Pedebos , Hugo Verli , Arthur Germano Fett-Neto
Glycobiology 27 ( 12) 1109 -1119
1
2017
Dynamics of DDB2-DDB1 complex under different naturally-occurring mutants in Xeroderma Pigmentosum disease
Bruno César Feltes , Conrado Pedebos , Diego Bonatto , Hugo Verli
Biochimica et Biophysica Acta 1862 ( 12) 2579 -2589
2
2018
Improving the Thrombin Inhibitory Activity of Glycyrrhizin, a Triterpenic Saponin, Through a Molecular Simplification of the Carbohydrate Moiety
Fernando T de Paula , Petrina Q Frauches , Conrado Pedebos , Markus Berger
Chemical Biology & Drug Design 82 ( 6) 756 -760
7
2013
Atomic Model and Micelle Dynamics of QS-21 Saponin
Conrado Pedebos , Laércio Pol-Fachin , Ramon Pons , Cilâine Teixeira
Molecules 19 ( 3) 3744 -3760
16
2014
Development of GROMOS-Compatible Parameter Set for Simulations of Chalcones and Flavonoids.
Pablo R. Arantes , Marcelo D. Polêto , Elisa B. O. John , Conrado Pedebos
Journal of Physical Chemistry B 123 ( 5) 994 -1008
5
2019
Making it rain: cloud-based molecular simulations for everyone
Pablo R Arantes , Marcelo D Polêto , Conrado Pedebos , Rodrigo Ligabue-Braun
Journal of Chemical Information and Modeling 61 ( 10) 4852 -4856
12
2021
Lipids mediate supramolecular outer membrane protein assembly in bacteria
Melissa N Webby , Abraham O Oluwole , Conrado Pedebos , Patrick G Inns
Science Advances 8 ( 44) eadc9566
4
2022
Simulations of the spike: molecular dynamics and SARS-CoV-2
Conrado Pedebos , Syma Khalid
Nature Reviews Microbiology 20 ( 4) 192 -192
6
2022
Structural basis for silicic acid uptake by higher plants
Bert van den Berg , Conrado Pedebos , Jani R Bolla , Carol V Robinson
Journal of Molecular Biology 433 ( 21) 167226 -167226
21
2021
The solute carrier SPNS2 recruits PI (4, 5) P2 to synergistically regulate transport of sphingosine-1-phosphate
Haiping Tang , Huanyu Li , Dheeraj Prakaash , Conrado Pedebos
Molecular Cell 83 ( 15) 2739 -2752. e5
6
2023
Uncovering cryptic pockets in the SARS-CoV-2 spike glycoprotein
Lorena Zuzic , Firdaus Samsudin , Aishwary T Shivgan , Palur V Raghuvamsi
Structure 30 ( 8) 1062 -1074. e4
30
2022
Donor-strand exchange drives assembly of the TasA scaffold in Bacillus subtilis biofilms
Jan Böhning , Mnar Ghrayeb , Conrado Pedebos , Daniel K Abbas
Nature Communications 13 ( 1) 7082 -7082
24
2022
Polymyxin B1 within the E. coli c ell envelope: insights from molecular dynamics simulations
Dhanushka Weerakoon , Kamen Petrov , Conrado Pedebos , Syma Khalid
Biophysical Reviews 1 -10
8
2021
Computational microbiology of bacteria: Advancements in molecular dynamics simulations
Syma Khalid , Astrid F Brandner , Nikolai Juraschko , Kahlan E Newman
Structure
4
2023