Accurate detection of low-level somatic mutations with technical replication for next-generation sequencing

Hoon-Chul Kang , Jae Seok Lim , Hojung Nam , Sangwoo Kim
bioRxiv 179713

1
2017
Vecuum: identification and filtration of false somatic variants caused by recombinant vector contamination

Junho Kim , Ju Heon Maeng , Jae Seok Lim , Hyeonju Son
Bioinformatics 32 ( 20) 3072 -3080

6
2016
The use of technical replication for detection of low-level somatic mutations in next-generation sequencing.

Junho Kim , Dachan Kim , Jae Seok Lim , Ju Heon Maeng
Nature Communications 10 ( 1) 1047

47
2019
Pan-cancer analysis identifies tumor-specific antigens derived from transposable elements

Nakul M Shah , H Josh Jang , Yonghao Liang , Ju Heon Maeng
Nature Genetics 55 ( 4) 631 -639

43
2023
Transposable elements are an abundant and pan-cancer source of shared tumor-specific antigens and membrane targets

Nakul M Shah , Hyo Sik Jang , Ju Heon Maeng , Shin-Cheng Tzeng
Cancer Research 81 ( 13_Supplement) 2225 -2225

2021
Using long-read CAGE sequencing to profile cryptic-promoter-derived transcripts and their contribution to the immunopeptidome

Ju Heon Maeng , H Josh Jang , Alan Y Du , Shin-Cheng Tzeng
Genome Research 33 ( 12) 2143 -2155

2
2023
Epigenetic therapy potentiates transposable element transcription to create tumor-enriched antigens in glioblastoma cells

H Josh Jang , Nakul M Shah , Ju Heon Maeng , Yonghao Liang
Nature Genetics 1 -11

2024