Circulating cell free DNA during definitive chemo-radiotherapy in non-small cell lung cancer patients - initial observations.

Lotte Nygård , Lise B Ahlborn , Gitte F Persson , Dineika Chandrananda
PLOS ONE 15 ( 4)

2
2020
Effects of Collection and Processing Procedures on Plasma Circulating Cell-Free DNA from Cancer Patients.

Charlotte Hodgkin , Linda Jones , Christine Parkinson , Anna Piskorz
The Journal of Molecular Diagnostics 20 ( 6) 883 -892

42
2018
ctDNA monitoring using patient-specific sequencing and integration of variant reads.

Jonathan CM Wan , Katrin Heider , Davina Gale , Suzanne Murphy
Science Translational Medicine 12 ( 548)

24
2020
Dynamics of multiple resistance mechanisms in plasma DNA during EGFR-targeted therapies in non-small cell lung cancer.

Dana Wai Yi Tsui , Muhammed Murtaza , Alvin Seng Cheong Wong , Oscar M Rueda
Embo Molecular Medicine 10 ( 6)

26
2018
Detection of cell-free DNA fragmentation and copy number alterations in cerebrospinal fluid from glioma patients.

Florent Mouliere , Richard Mair , Dineika Chandrananda , Francesco Marass
Embo Molecular Medicine 10 ( 12)

48
2018
High-resolution characterization of sequence signatures due to non-random cleavage of cell-free DNA

Dineika Chandrananda , Natalie P. Thorne , Melanie Bahlo
BMC Medical Genomics 8 ( 1) 29 -29

70
2015
Investigating and Correcting Plasma DNA Sequencing Coverage Bias to Enhance Aneuploidy Discovery

Dineika Chandrananda , Natalie P. Thorne , Devika Ganesamoorthy , Damien L. Bruno
PLoS ONE 9 ( 1) e86993

22
2014
Enhanced detection of circulating tumor DNA by fragment size analysis

Florent Mouliere , Dineika Chandrananda , Anna M. Piskorz , Elizabeth K. Moore
Science Translational Medicine 10 ( 466)

622
2018
Comprehensive characterization of cell-free tumor DNA in plasma and urine of patients with renal tumors.

Christopher G Smith , Tina Moser , Florent Mouliere , Johanna Field-Rayner
Genome Medicine 12 ( 1) 23

65
2020
Characteristics, origin, and potential for cancer diagnostics of ultrashort plasma cell-free DNA

Irena Hudecova , Christopher G Smith , Robert Hänsel-Hertsch , Chandra S Chilamakuri
Genome Research 32 ( 2) 215 -227

13
2022
Custom workflows to improve joint variant calling from multiple related tumour samples: FreeBayesSomatic and Strelka2Pass

Sebastian Hollizeck , Stephen Q Wong , B Solomon , Dineika Chandrananda
Bioinformatics 37 ( 21) 3916 -3919

2021
Fragmentation patterns and personalized sequencing of cell‐free DNA in urine and plasma of glioma patients

Florent Mouliere , Christopher G Smith , Katrin Heider , Jing Su
EMBO molecular medicine 13 ( 8) e12881 -e12881

77
2021
Refined characterization of circulating tumor DNA through biological feature integration

Havell Markus , Dineika Chandrananda , Elizabeth Moore , Florent Mouliere
Scientific reports 12 ( 1) 1928 -1928

34
2022
The landscape of cell-free mitochondrial DNA in liquid biopsy for cancer detection

Ymke van der Pol , Norbert Moldovan , Jip Ramaker , Sanne Bootsma
Genome Biology 24 ( 1) 229 -229

6
2023
Measurement of plasma cell-free mitochondrial tumor DNA improves detection of glioblastoma in patient-derived orthotopic xenograft models.

Richard Mair , Florent Mouliere , Christopher G Smith , Dineika Chandrananda
Cancer Research canres. 0074.2018 -canres. 0074.2018

83
2018
Association of Plasma and Urinary Mutant DNA with Clinical Outcomes in Muscle Invasive Bladder Cancer

K. M. Patel , K. E. van der Vos , C. G. Smith , F. Mouliere
Scientific Reports 7 ( 1) 5554 -5554

37
2017