An inter-laboratory study to investigate the impact of the bioinformatics component on microbiome analysis using mock communities.

Sasithon Temisak , Alexandra S Whale , David J Studholme , Julian Parkhill
Scientific Reports 11 ( 1) 10590

2021
Frequent Undetected Ward-Based Methicillin-Resistant Staphylococcus aureus Transmission Linked to Patient Sharing Between Hospitals

Olga Tosas Auguet , Richard A Stabler , Jason Betley , Mark D Preston
Clinical Infectious Diseases 66 ( 6) 840 -848

18
2018
Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences

Francesc Coll , Ruth McNerney , Mark D Preston , José Afonso Guerra-Assunção
Genome Medicine 7 ( 1) 51 -51

367
2015
Frequent undetected MRSA ward-based transmission linked to patient sharing between hospitals

O Auguet , Richard A Stabler , Jason Betley , Mark D Preston
Clinical Infectious Diseases 66 ( 6)

3
2017
PlasmoView: A Web-based Resource to Visualise Global Plasmodium falciparum Genomic Variation

Mark D Preston , Samuel A Assefa , Harold Ocholla , Colin J Sutherland
The Journal of Infectious Diseases 209 ( 11) 1808 -1815

20
2014
Molecular BioSystems c6mb00857g

Timothy R Rudd , Mark D Preston , Edwin A Yates

A Nyström Method for a Boundary Value Problem arising in Unsteady Water Wave

Mark D Preston , Peter G Chamberlain , Simon N Chandler-Wilde

2009
From FASTQ to function: in silico methods for processing next-generation sequencing data

Mark D Preston , Richard A Stabler
Clostridium difficile: Methods and Protocols 23 -33

1
2016
Pathway-Wide Genetic Risks in Chlamydial Infections Overlap between Tissue Tropisms: A Genome-Wide Association Scan.

Chrissy H Roberts , Sander Ouburg , Mark D Preston , Henry JC de Vries
Mediators of Inflammation 2018 3434101 -3434101

1
2018
A barcode of organellar genome polymorphisms identifies the geographic origin of Plasmodium falciparum strains.

Mark D Preston , Susana Campino , Samuel A Assefa , Diego F Echeverry
Nature Communications 5 ( 1) 4052 -4052

123
2014
ETS factors are required but not sufficient for specific patterns of enhancer activity in different endothelial subtypes.

Natalia Sacilotto , Svanhild Nornes , Mark D. Preston , Sarah De Val
Developmental Biology 473 1 -14

2021
Population genomic structure and adaptation in the zoonotic malaria parasite Plasmodium knowlesi

Samuel Assefa , Caeul Lim , Mark D. Preston , Craig W. Duffy
Proceedings of the National Academy of Sciences 112 ( 42) 13027 -13032

52
2015
Evolutionary optimality in stochastic search problems

Mark D. Preston , Jonathan W. Pitchford , A. Jamie Wood
Journal of the Royal Society Interface 7 ( 50) 1301 -1310

22
2010
Clostridium difficile clade 3 (RT023) have a modified cell surface and contain a large transposable island with novel cargo

Helen Alexandra Shaw , Ladan Khodadoost , Mark D. Preston , Jeroen Corver
Scientific Reports 9 ( 1) 15330 -15330

1
2019
Para-cresol production by Clostridium difficile affects microbial diversity and membrane integrity of Gram-negative bacteria.

Ian J. Passmore , Marine P. M. Letertre , Mark D. Preston , Irene Bianconi
PLOS Pathogens 14 ( 9)

45
2018
estMOI: estimating multiplicity of infection using parasite deep sequencing data

Samuel A. Assefa , Mark D. Preston , Susana Campino , Harold Ocholla
Bioinformatics 30 ( 9) 1292 -1294

44
2014
SVAMP: Sequence variation analysis, maps and phylogeny

Raeece Naeem , Lailatul Hidayah , Mark D. Preston , Taane G. Clark
Bioinformatics 30 ( 15) 2227 -2229

4
2014
SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences

Francesc Coll , Kim Mallard , Mark D. Preston , Stephen Bentley
Bioinformatics 28 ( 22) 2991 -2993

72
2012