引用次数
引用: 413
H-指数: 8
I10-指数 : 6
出版物: 17
Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir. Sci Data 8: 31
JA Fellows Yates , A Andrades Valtueña , ÅJ Vågene , B Cribdon
7
2021
PyDamage: automated ancient damage identification and estimation for contigs in ancient DNA de novo assembly. PeerJ 9: e11845
M Borry , A Hübner , AB Rohrlach , C Warinner
6
2021
Foldit, un jeu pour faire de la recherche
Fanny BERNARDON , Maxime BORRY , Maria POTHIER
La Recherche (Imprimé) ( 467) 68 -71
2012
Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir
James A Fellows Yates , Aida Andrades Valtueña , Åshild J Vågene , Becky Cribdon
Scientific Data 8 ( 1) 1 -8
2
2021
Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager
James A Fellows Yates , Thiseas C Lamnidis , Maxime Borry , Aida Andrades Valtueña
PeerJ 9
2021
Reconstruction of ancient microbial genomes from the human gut
Nicola Segata , Humberto García-Ortiz , Sünje Johanna Pamp , Christina Warinner
Nature 1 -6
102
2021
CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content.
Maxime Borry , Bryan Cordova , Angela Perri , Marsha Wibowo
PeerJ 8
11
2020
Sourcepredict: Prediction of metagenomic sample sources using dimension reduction followed by machine learning classification
Maxime Borry
The Journal of Open Source Software 4 ( 41) 1540
3
2019
Natural products from reconstructed bacterial genomes of the Middle and Upper Paleolithic
Martin Klapper , Alexander Hübner , Anan Ibrahim , Ina Wasmuth
Science 380 ( 6645) 619 -624
20
2023
Facilitating accessible, rapid, and appropriate processing of ancient metagenomic data with AMDirT
Maxime Borry , Adrian Forsythe , Aida Andrades Valtueña , Alexander Hübner
F1000Research 12 926 -926
1
2024
Facilitating accessible, rapid, and appropriate processing o f ancient metagenomic data with AMDirT [version 1; peer
Maxime Borry , Adrian Forsythe , Aida Andrades Valtueña , Alexander Hübner
PyDamage: automated ancient damage identification and estimation for contigs in ancient DNA de novo assembly
Maxime Borry , Alexander Hübner , Adam B Rohrlach , Christina Warinner
PeerJ 9 e11845 -e11845
24
2021
sam2lca: Lowest Common Ancestor for SAM/BAM/CRAM alignment files
Maxime Borry , Alexander Hübner , Christina Warinner
Journal of Open Source Software 7 ( 74) 4360 -4360
2
2022
Taxpasta: Taxonomic profile aggregation and standardisation
Moritz E Beber , Maxime Borry , Sofia Stamouli , James A Fellows Yates
Journal of Open Source Software 8 ( 87) 5627 -5627
2
2023
nf-core/taxprofiler: Highly parallelised and flexible pipeline for metagenomic taxonomic classification and profiling
Sofia Stamouli , Moritz E Beber , Tanja Normark , Thomas A Christensen
bioRxiv 2023.10. 20.563221 -2023.10. 20.563221
1
2023
CoproID predicts the source of coprolites and paleofeces using microbiome composition and host DNA content. PeerJ 8: e9001
Maxime Borry , Bryan Cordova , Angela Perri , Marsha Wibowo
8
2020
James A. Fellows Yates Christina Warinner Alexander Hübner Judith Neukamm Irina M Velsko Choongwon Jeong Aleksandar David Kostic Linus Girdland Flink Helene Carabin Richard W. Hagan Robert C Power Angela R. Perri Bryan Cordova Alexander Herbig Tanvi Prasad Honap Marsha Wibowo Courtney Hofman Prof. Kate Britton Domingo Carlos Salazar-García