Enabling proton transfer in classical simulations

Themis Lazaridis
Bulletin of the American Physical Society

2017
General Chemistry 2

Themis Lazaridis

2019
Modeling Protein–Micelle Systems in Implicit Water

RodneyE. Versace , Themis Lazaridis
The Journal of Physical Chemistry

2015
Mechanism of negative membrane curvature generation by the IRSP53 I-BAR domain

Binod Nepal , Themis Lazaridis , Themis Lazaridis , Aliasghar Sepehri
bioRxiv

2020
Lipid interactions of an actinoporin pore-forming oligomer.

Binod Nepal , Themis Lazaridis , Aliasghar Sepehri
Biophysical Journal 120 ( 8) 1357 -1366

2021
Voltage-dependent energetics of alamethicin monomers in the membrane.

Madhusoodanan Mottamal , Themis Lazaridis
Biophysical Chemistry 122 ( 1) 50 -57

35
2006
Transmembrane Helix Association Affinity Can Be Modulated by Flanking and Noninterfacial Residues

Jinming Zhang , Themis Lazaridis
Biophysical Journal 96 ( 11) 4418 -4427

21
2009
The Treatment of Solvent in Multiscale Biophysical Modeling

Themis Lazaridis , Rodney Versace
Israel Journal of Chemistry 54 1074 -1083

7
2014
Classical Molecular Dynamics with Mobile Protons

Themis Lazaridis , Gerhard Hummer
Journal of Chemical Information and Modeling 57 ( 11) 2833 -2845

8
2017
Entropy of hydrophobic hydration: a new statistical mechanical formulation

Themis Lazaridis , Michael E. Paulaitis
Fluid Phase Equilibria 83 43 -49

1
1993
Heat capacity and compactness of denatured proteins.

Themis Lazaridis , Martin Karplus
Biophysical Chemistry 78 ( 1) 207 -217

32
1999
Thermodynamics of protein folding: a microscopic view.

Themis Lazaridis , Martin Karplus
Biophysical Chemistry 100 ( 1) 367 -395

104
2002
Computational Studies of Colicin Insertion into Membranes: the Closed State

Lidia Prieto , Themis Lazaridis
Biophysical Journal 98 ( 3)

2010
Computational Studies of Interfacial Binding Dynamics of Phospholipase A2

Anna Manukyan , Themis Lazaridis
Biophysical Journal 100 ( 3)

2011
Inhomogeneous Fluid Approach to Solvation Thermodynamics. 1. Theory

Themis Lazaridis
Journal of Physical Chemistry B 102 ( 18) 3531 -3541

342
1998
Inhomogeneous Fluid Approach to Solvation Thermodynamics. 2. Applications to Simple Fluids

Themis Lazaridis
Journal of Physical Chemistry B 102 ( 18) 3542 -3550

120
1998
Solvent Reorganization Energy and Entropy in Hydrophobic Hydration

Themis Lazaridis
Journal of Physical Chemistry B 104 ( 20) 4964 -4979

91
2000
Dynamics of the Influenza Hemagglutinin Fusion Peptide: A Comparison of MD and NMR

Themis Lazaridis , Allyn R. Brice
Biophysical Journal 104 ( 2)

2013
Inclusion of Lateral Pressure/Curvature Stress Effects in Implicit Membrane Models

Huan Zhan , Themis Lazaridis
Biophysical Journal 104 ( 3) 643 -654

24
2013
Membrane interactions and pore formation by the antimicrobial peptide protegrin.

Themis Lazaridis , Yi He , Lidia Prieto
Biophysical Journal 104 ( 3) 633 -642

38
2013