Doo Nam Kim
机构: Pacific Northwest National Laboratory
每年引用次数
引用次数
引用: 372
H-指数: 10
I10-指数 : 10
出版物: 29
Tools for the cryo-EM gold rush: going from the cryo-EM map to the atomistic model.
Doo Nam Kim , Karissa Y. Sanbonmatsu
Bioscience Reports 37 ( 6)
12
2017
Graph identification of proteins in tomograms (GRIP-Tomo)
Margaret Cheung , August George , Doonam Kim , Trevor Moser
APS March Meeting Abstracts 2023 Z10. 006 -Z10. 006
2023
Preliminary estimation of current state of Chilean Jack Mackerel (Trachurus murphyi) stock in the high seas in the South East Pacific
Dmitry Vasilyev , Alexander Glubokov , Doonam Kim
SPRFMO Chilean Jack Mackerel Workshop, Santiago 30
1
2008
2016
Boosting protein stability with the computational design of β-sheet surfaces.
Doo Nam Kim , Timothy M. Jacobs , Brian Kuhlman
Protein Science 25 ( 3) 702 -710
6
2016
Cryo_fit: Democratization of flexible fitting for cryo-EM.
Doo Nam Kim , Nigel W. Moriarty , Serdal Kirmizialtin , Pavel V. Afonine
Journal of Structural Biology 208 ( 1) 1 -6
12
2019
Practical Considerations for Atomistic Structure Modeling with Cryo-EM Maps.
Doo Nam Kim , Dominik Gront , Karissa Y. Sanbonmatsu
Journal of Chemical Information and Modeling 60 ( 5) 2436 -2442
7
2020
In silico prediction system of CYP450-mediated metabolism profile
Hyesun Han , Won Seok Oh , Ji Hoon Jung , Doo Nam Kim
BMC Systems Biology 1 ( 1) 23
2007
Zinc-finger Protein CNBP Alters the 3-D Structure of lncRNA Braveheart in Solution
Doo Nam Kim , Bernhard C. Thiel , Tyler Mrozowich , Scott P. Hennelly
Nature Communications 11 ( 1) 148
50
2020
New Combined Model for the Prediction of Regioselectivity in Cytochrome P450/3A4 Mediated Metabolism.
Won Seok Oh , Doo Nam Kim , Jihoon Jung , Kwang-Hwi Cho
ChemInform 39 ( 24)
57
2008
Regioselectivity prediction of CYP1A2-mediated phase I metabolism.
Jihoon Jung , Nam Doo Kim , Su Yeon Kim , Inhee Choi
Journal of Chemical Information and Modeling 48 ( 5) 1074 -1080
45
2008
EaMEAD: Activation energy prediction of cytochrome P450 mediated metabolism with effective atomic descriptors.
Doo Nam Kim , Kwang-Hwi Cho , Won Seok Oh , Chang Joon Lee
Journal of Chemical Information and Modeling 49 ( 7) 1643 -1654
21
2009
The Superfund Research Program Analytics Portal: linking environmental chemical exposure to biological phenotypes
Sara JC Gosline , Doo Nam Kim , Paritosh Pande , Dennis G Thomas
Scientific Data 10 ( 1) 151 -151
1
2023
Tunable heteroassembly of a plant pseudoenzyme–enzyme complex
Irina V Novikova , Mowei Zhou , Chen Du , Marcelina Parra
ACS chemical biology 16 ( 11) 2315 -2325
19
2021
Dirigent isoflavene-forming PsPTS2: 3D Structure, stereochemical and kinetic characterization comparison with pterocarpan-forming PsPTS1 homolog in pea
Qingyan Meng , Syed GA Moinuddin , Rhodesia M Celoy , Clyde A Smith
Journal of Biological Chemistry 105647 -105647
2024
AutoMicroED: A semi-automated MicroED processing pipeline
Samantha M Powell , Irina V Novikova , Doo Nam Kim , James E Evans
bioRxiv 2021.12. 13.472146 -2021.12. 13.472146
1
2021
Graph identification of proteins in tomograms (GRIP‐Tomo)
August George , Doo Nam Kim , Trevor Moser , Ian T Gildea
Protein Science 32 ( 1) e4538 -e4538
2023
Applying the Semi-Automated MicroED Processing Pipeline, AutoMicroED
Samantha M Powell , Irina V Novikova , Doo Nam Kim , James E Evans
Microscopy and Microanalysis 28 ( S1) 1084 -1085
2022
Data From EMSL Project 51710: Opportunities linking omics and structural biology at PNNL: Excelling at Cryo-EM
James Evans , Trevor Moser , Irina Novikova , Amar Parvate
Pacific Northwest National Lab.(PNNL), Richland, WA (United States). Environmental Molecular Sciences Lab.(EMSL) ( upload_id: 2566664; project_id: 51710)
2022
Structures via Reasoning-Applying AI to Cryo Electron Microscopy to Reveal Structural Variability
Doo Nam Kim , Andrew J August , Henry J Kvinge , James Evans
Pacific Northwest National Laboratory (PNNL), Richland, WA (United States) ( PNNL-33162)
2022