AWclust: point-and-click software for non-parametric population structure analysis

Xiaoyi Gao , Joshua D Starmer
BMC Bioinformatics 9 ( 1) 77 -77

55
2008
Avoiding the high Bonferroni penalty in genome‐wide association studies

Xiaoyi Gao , Lewis C Becker , Diane M Becker , Joshua D Starmer
Genetic Epidemiology: The Official Publication of the International Genetic Epidemiology Society 34 ( 1) 100 -105

376
2010
Gene-Specific DNA Methylation Changes Predict Remission in Patients with ANCA-Associated Vasculitis

Britta E. Jones , Jiajin Yang , Akhil Muthigi , Susan L. Hogan
Journal of The American Society of Nephrology 28 ( 4) 1175 -1187

24
2017
Interactome determination of a Long Noncoding RNA implicated in Embryonic Stem Cell Self-Renewal.

Keriayn N. Smith , Joshua Starmer , Terry Magnuson
Scientific Reports 8 ( 1) 17568

7
2018
Mitochondrial Hydrogen Peroxide and Defective Cholesterol Efflux Prevent In Vitro Fertilization by Cryopreserved Inbred Mouse Sperm

Jeffrey E. Gray , Joshua Starmer , Vivian S. Lin , Bryan C. Dickinson
Biology of Reproduction 89 ( 1) 17 -17

11
2013
Schwann cell–derived periostin promotes autoimmune peripheral polyneuropathy via macrophage recruitment

Denise E. Allard , Yan Wang , Jian Joel Li , Bridget Conley
Journal of Clinical Investigation 128 ( 10) 4727 -4741

11
2018
Evidence of Xist RNA-independent initiation of mouse imprinted X-chromosome inactivation

Sundeep Kalantry , Sonya Purushothaman , Randall Bryant Bowen , Joshua Starmer
Nature 460 ( 7255) 647 -651

110
2009
Topoisomerases facilitate transcription of long genes linked to autism

Angela M. Mabb , Jack S. Hsiao , Hsien-Sung Huang , Brandon L. Pearson
Nature 501 ( 7465) 58 -62

266
2013
lncRNA-Induced Spread of Polycomb Controlled by Genome Architecture, RNA Abundance, and CpG Island DNA

Megan D. Schertzer , Keean C.A. Braceros , Joshua Starmer , Rachel E. Cherney
Molecular Cell 75 ( 3) 523 -537.e10

72
2019
T Follicular Helper Cell-Dependent Clearance of a Persistent Virus Infection Requires T Cell Expression of the Histone Demethylase UTX.

Fatima Whitfield-Larry , Bridget Conley , Denise E. Allard , Julia E. Rager
Immunity 43 ( 4) 703 -714

42
2015
Evidence for Local Regulatory Control of Escape from Imprinted X Chromosome Inactivation

Joshua W. Mugford , Joshua Starmer , Rex L. Williams , J. Mauro Calabrese
Genetics 197 ( 2) 715 -723

14
2014
Coexistent ARID1A–PIK3CA mutations promote ovarian clear-cell tumorigenesis through pro-tumorigenic inflammatory cytokine signalling

Ronald L. Chandler , Jeffrey S. Damrauer , Jesse R. Raab , Jonathan C. Schisler
Nature Communications 6 ( 1) 6118 -6118

262
2015
fourSig: a method for determining chromosomal interactions in 4C-Seq data

Rex L. Williams , Joshua Starmer , Joshua W. Mugford , J. Mauro Calabrese
Nucleic Acids Research 42 ( 8)

33
2014
Repression of the soma-specific transcriptome by Polycomb-repressive complex 2 promotes male germ cell development

Weipeng Mu , Joshua Starmer , Andrew M. Fedoriw , Della Yee
Genes & Development 28 ( 18) 2056 -2069

89
2014
Histone H3.3 maintains genome integrity during mammalian development

Chuan-Wei Jang , Yoichiro Shibata , Joshua Starmer , Della Yee
Genes & Development 29 ( 13) 1377 -1392

92
2015
UTX-guided neural crest function underlies craniofacial features of Kabuki syndrome.

Karl B. Shpargel , Joshua Starmer , Chaochen Wang , Kai Ge
Proceedings of the National Academy of Sciences of the United States of America 114 ( 43) 201705011

37
2017
KDM6 Demethylase Independent Loss of Histone H3 Lysine 27 Trimethylation during Early Embryonic Development

Karl B. Shpargel , Joshua Starmer , Della Yee , Michael Pohlers
PLoS Genetics 10 ( 8) e1004507

77
2014
Detecting broad domains and narrow peaks in ChIP-seq data with hiddenDomains.

Joshua Starmer , Terry Magnuson
BMC Bioinformatics 17 ( 1) 144 -144

26
2016
Nucleolar Association and Transcriptional Inhibition through 5S rDNA in Mammals

Andrew M. Fedoriw , Joshua Starmer , Della Yee , Terry Magnuson
PLoS Genetics 8 ( 1) e1002468

31
2012