High resolution longitudinal molecular and morphological tracking of planktonic threats to salmon aquaculture: new candidates and old players

María Algueró-Muñiz , Sofie Spatharis , Toni Dwyer , Michele de Noia
bioRxiv 2023.09. 04.556215 -2023.09. 04.556215

2023
The yellow perch (Perca flavescens) microbiome revealed resistance to colonisation mostly associated with neutralism driven by rare taxa under cadmium disturbance

Bachar Cheaib , Hamza Seghouani , Martin Llewellyn , Katherine Vandal-Lenghan
Animal Microbiome 3 ( 1) 1 -19

1
2021
pH drop impacts differentially skin and gut microbiota of the Amazonian fish tambaqui (Colossoma macropomum)

François-Étienne Sylvain , Bachar Cheaib , Martin Llewellyn , Tiago Gabriel Correia
Scientific Reports 6 ( 1) 32032 -32032

116
2016
Taxon-Function Decoupling as an Adaptive Signature of Lake Microbial Metacommunities Under a Chronic Polymetallic Pollution Gradient.

Bachar Cheaib , Malo Le Boulch , Pierre-Luc Mercier , Nicolas Derome
Frontiers in Microbiology 9 869

10
2018
Community recovery dynamics in yellow perch microbiome after gradual and constant metallic perturbations

Bachar Cheaib , Hamza Seghouani , Umer Zeeshan Ijaz , Nicolas Derome
Microbiome 8 ( 1) 1 -19

9
2020
Deep Sequencing of the Trypanosoma cruzi GP63 Surface Proteases Reveals Diversity and Diversifying Selection among Chronic and Congenital Chagas Disease Patients

Martin S. Llewellyn , Louisa A. Messenger , Alejandro O. Luquetti , Lineth Garcia
PLOS Neglected Tropical Diseases 9 ( 4)

32
2015
Population genomics and geographic dispersal in Chagas disease vectors: Landscape drivers and evidence of possible adaptation to the domestic setting

Luis E Hernandez-Castro , Anita G Villacís , Arne Jacobs , Bachar Cheaib
PLoS Genetics 18 ( 2) e1010019

3
2022
Links between host genetics, metabolism, gut microbiome and amoebic gill disease (AGD) in Atlantic salmon

Patrick Schaal , Bachar Cheaib , Joshka Kaufmann , Karl Phillips
Animal Microbiome 4 ( 1) 53 -53

8
2022
Deploying an in vitro gut model to assay the impact of the mannan-oligosaccharide prebiotic Bio-Mos on the Atlantic salmon (Salmo salar) gut microbiome

Raminta Kazlauskaite , Bachar Cheaib , Joseph Humble , Chloe Heys
Microbiology Spectrum 10 ( 3) e01953 -21

5
2022
4
2021
γδ T cells control murine skin inflammation and subcutaneous adipose wasting during chronic Trypanosoma brucei infection

Juan F Quintana , Matthew C Sinton , Praveena Chandrasegaran , Agatha Nabilla Lestari
Nature Communications 14 ( 1) 5279 -5279

3
2023
Spatially-resolved single cell transcriptomics reveal a critical role for γδ T cells in the control of skin inflammation and subcutaneous adipose wasting during chronic Trypanosoma brucei infection

Juan F Quintana , Matthew C Sinton , Praveena Chandrasegaran , Agatha Nabilla Lestari
bioRxiv 2023.03. 01.530674 -2023.03. 01.530674

2023
Contribution of Clinical Metagenomics to the Diagnosis of Bone and Joint Infections

Shishir K Gupta , Bachar Cheaib , Teresa Street , Natacha Couto

Environmental disturbance shapes the gut microbiome in yellow perch

Bachar Cheaib , Hamza Seghouani , Umer Zeeshan Ijaz , Nicolas Derome

2020
21
2021
Network analyses structure genetic diversity in independent genetic worlds

S. Halary , J. W. Leigh , B. Cheaib , P. Lopez
Proceedings of the National Academy of Sciences of the United States of America 107 ( 1) 127 -132

284
2010