Clinical implications of genomic alterations in the tumour and circulation of pancreatic cancer patients

作者: Mark Sausen , Jillian Phallen , Vilmos Adleff , Siân Jones , Rebecca J Leary

DOI: 10.1038/NCOMMS8686

关键词: Cancer therapyDNASomatic cellGenomicsCancer researchRegulation of gene expressionBioinformaticsPancreatic cancerBiologyGeneChromatin

摘要: Somatic mutations have been reported in pancreatic adenocarcinomas. Here, Sausen et al. identify further and find that the chromatin modifying gene, MLL, are associated with increased survival, presence of circulating tumour DNA serum patients is poor survival.

参考文章(30)
Andrew Scott Paulson, Hop S. Tran Cao, Margaret A. Tempero, Andrew M. Lowy, Therapeutic advances in pancreatic cancer. Gastroenterology. ,vol. 144, pp. 1316- 1326 ,(2013) , 10.1053/J.GASTRO.2013.01.078
Aaron M Newman, Scott V Bratman, Jacqueline To, Jacob F Wynne, Neville C W Eclov, Leslie A Modlin, Chih Long Liu, Joel W Neal, Heather A Wakelee, Robert E Merritt, Joseph B Shrager, Billy W Loo, Ash A Alizadeh, Maximilian Diehn, An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage Nature Medicine. ,vol. 20, pp. 548- 554 ,(2014) , 10.1038/NM.3519
S. A. Forbes, N. Bindal, S. Bamford, C. Cole, C. Y. Kok, D. Beare, M. Jia, R. Shepherd, K. Leung, A. Menzies, J. W. Teague, P. J. Campbell, M. R. Stratton, P. A. Futreal, COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer. Nucleic Acids Research. ,vol. 39, pp. 945- 950 ,(2011) , 10.1093/NAR/GKQ929
Siân Jones, Meng Li, D. Williams Parsons, Xiaosong Zhang, Jelle Wesseling, Petra Kristel, Marjanka K. Schmidt, Sanford Markowitz, Hai Yan, Darell Bigner, Ralph H. Hruban, James R. Eshleman, Christine A. Iacobuzio‐Donahue, Michael Goggins, Anirban Maitra, Sami N. Malek, Steve Powell, Bert Vogelstein, Kenneth W. Kinzler, Victor E. Velculescu, Nickolas Papadopoulos, Somatic mutations in the chromatin remodeling gene ARID1A occur in several tumor types Human Mutation. ,vol. 33, pp. 100- 103 ,(2012) , 10.1002/HUMU.21633
Y. Jiao, C. Shi, B. H. Edil, R. F. de Wilde, D. S. Klimstra, A. Maitra, R. D. Schulick, L. H. Tang, C. L. Wolfgang, M. A. Choti, V. E. Velculescu, L. A. Diaz, B. Vogelstein, K. W. Kinzler, R. H. Hruban, N. Papadopoulos, Daxx/atrx, men1, and mtor pathway genes are frequently altered in pancreatic neuroendocrine tumors Science. ,vol. 331, pp. 1199- 1203 ,(2011) , 10.1126/SCIENCE.1200609
Susumu Goyama, James C. Mulloy, NF-κB: A Coordinator for Epigenetic Regulation by MLL Cancer Cell. ,vol. 24, pp. 401- 402 ,(2013) , 10.1016/J.CCR.2013.09.016
Saul B. Needleman, Christian D. Wunsch, A general method applicable to the search for similarities in the amino acid sequence of two proteins Journal of Molecular Biology. ,vol. 48, pp. 443- 453 ,(1970) , 10.1016/0022-2836(70)90057-4
Ralph H. Hruban, Scott E. Kern, Michiel S. van der Heijden, Jonathan R. Brody, David A. Dezentje, Eike Gallmeier, Steven C. Cunningham, Michael J. Swartz, Angelo M. DeMarzo, G. Johan A. Offerhaus, William H. Isacoff, In vivo Therapeutic Responses Contingent on Fanconi Anemia/BRCA2 Status of the Tumor Clinical Cancer Research. ,vol. 11, pp. 7508- 7515 ,(2005) , 10.1158/1078-0432.CCR-05-1048
Mark Sausen, Rebecca J Leary, Siân Jones, Jian Wu, C Patrick Reynolds, Xueyuan Liu, Amanda Blackford, Giovanni Parmigiani, Luis A Diaz, Nickolas Papadopoulos, Bert Vogelstein, Kenneth W Kinzler, Victor E Velculescu, Michael D Hogarty, Integrated genomic analyses identify ARID1A and ARID1B alterations in the childhood cancer neuroblastoma. Nature Genetics. ,vol. 45, pp. 12- 17 ,(2013) , 10.1038/NG.2493
K. A. Baggerly, L. Deng, J. S. Morris, C. M. Aldaz, Differential expression in SAGE: accounting for normal between-library variation Bioinformatics. ,vol. 19, pp. 1477- 1483 ,(2003) , 10.1093/BIOINFORMATICS/BTG173