A polymer physics perspective on driving forces and mechanisms for protein aggregation.

作者: Rohit V. Pappu , Xiaoling Wang , Andreas Vitalis , Scott L. Crick

DOI: 10.1016/J.ABB.2007.08.033

关键词: NanotechnologyLow proteinClinical phenotypeMechanism (biology)Protein aggregationColloidal particlePolymer physicsChain lengthBiophysicsChemistry

摘要: Protein aggregation is a commonly occurring problem in biology. Cells have evolved stress-response mechanisms to cope with problems posed by protein aggregation. Yet, these quality control are overwhelmed chronic aggregation-related stress and the resultant consequences of become toxic cells. As result, variety systemic neurodegenerative diseases associated various aspects rational approaches either inhibit or manipulate pathways might lead an alleviation disease phenotypes. To develop such approaches, one needs rigorous quantitative understanding Much work has been done this area. However, several unanswered questions linger, pertain primarily actual mechanism as well types intermolecular associations intramolecular fluctuations realized at low concentrations. It suggested that concepts underlying similar those used describe synthetic polymers. Following suggestion, relevant polymer introduced. The focus on explaining driving forces for how vary chain length solution conditions. widely accepted nucleation-dependent process. This view based mainly presence long times accumulation aggregates elimination lag “seeds”. In sense, viewed being analogous colloidal particles. theories reviewed suggest alternative origin proposed derives from recognition polymers unique dynamics distinguish them other aggregation-prone systems

参考文章(103)
Frank Ferrone, Analysis of protein aggregation kinetics. Methods in Enzymology. ,vol. 309, pp. 256- 274 ,(1999) , 10.1016/S0076-6879(99)09019-9
Paul J. Flory, Principles of polymer chemistry ,(1953)
Frank A. Ferrone, Nucleation: the connections between equilibrium and kinetic behavior. Methods in Enzymology. ,vol. 412, pp. 285- 299 ,(2006) , 10.1016/S0076-6879(06)12017-0
Rakez Kayed, Charles G. Glabe, Conformation-dependent anti-amyloid oligomer antibodies. Methods in Enzymology. ,vol. 413, pp. 326- 344 ,(2006) , 10.1016/S0076-6879(06)13017-7
Yong‐Sung Kim, Theodore W. Randolph, Matthew B. Seefeldt, John F. Carpenter, High-pressure studies on protein aggregates and amyloid fibrils. Methods in Enzymology. ,vol. 413, pp. 237- 253 ,(2006) , 10.1016/S0076-6879(06)13013-X
José Nelson Onuchic, Hugh Nymeyer, Angel E. García, Jorge Chahine, Nicholas D. Socci, The energy landscape theory of protein folding: Insights into folding mechanisms and scenarios Advances in Protein Chemistry. ,vol. 53, pp. 87- 152 ,(2000) , 10.1016/S0065-3233(00)53003-4
Gillian P. Bates, History of genetic disease: The molecular genetics of Huntington disease — a history Nature Reviews Genetics. ,vol. 6, pp. 766- 773 ,(2005) , 10.1038/NRG1686
Andreas Vitalis, Xiaoling Wang, Rohit V. Pappu, Quantitative characterization of intrinsic disorder in polyglutamine: insights from analysis based on polymer theories. Biophysical Journal. ,vol. 93, pp. 1923- 1937 ,(2007) , 10.1529/BIOPHYSJ.107.110080
Sandy D. Westerheide, Richard I. Morimoto, Heat shock response modulators as therapeutic tools for diseases of protein conformation. Journal of Biological Chemistry. ,vol. 280, pp. 33097- 33100 ,(2005) , 10.1074/JBC.R500010200