An Engineered Aryl Azide Ligase for Site‐Specific Mapping of Protein–Protein Interactions through Photo‐Cross‐Linking

作者: Hemanta Baruah , Sujiet Puthenveetil , Yoon-Aa Choi , Samit Shah , Alice Y. Ting

DOI: 10.1002/ANIE.200802088

关键词: Binding siteBiochemistryAzideDNA ligaseProtein–protein interactionFKBPProtein engineeringArylFusion proteinChemistry

摘要: We re-engineered the small-molecule binding site of E. coli lipoic acid ligase (LplA) to accept a fluorinated aryl azide probe in place acid. The mutated can covalently attach recombinant proteins fused 17-amino recognition sequence for LplA (called "LAP"). Labeling is highly specific, modifying LAP fusion exclusion all endogenous mammalian proteins. In cell lysate, we labeled FKBP with and demonstrated rapamycin-dependent photocrosslinking FRB.

参考文章(34)
Tao Lu, Alice Y. Ting, Joel Mainland, Lily Y. Jan, Peter G. Schultz, Jian Yang, Probing ion permeation and gating in a K+ channel with backbone mutations in the selectivity filter. Nature Neuroscience. ,vol. 4, pp. 239- 246 ,(2001) , 10.1038/85080
A Chapman-Smith, D L Turner, J E Cronan, T W Morris, J C Wallace, Expression, biotinylation and purification of a biotin-domain peptide from the biotin carboxy carrier protein of Escherichia coli acetyl-CoA carboxylase Biochemical Journal. ,vol. 302, pp. 881- 887 ,(1994) , 10.1042/BJ3020881
Wenyuan Wang, Jeffrey K Takimoto, Gordon V Louie, Thomas J Baiga, Joseph P Noel, Kuo-Fen Lee, Paul A Slesinger, Lei Wang, Genetically encoding unnatural amino acids for cellular and neuronal studies Nature Neuroscience. ,vol. 10, pp. 1063- 1072 ,(2007) , 10.1038/NN1932
Jason W. Chin, Stephen W. Santoro, Andrew B. Martin, David S. King, Lei Wang, Peter G. Schultz, Addition of p-Azido-l-phenylalanine to the Genetic Code of Escherichia coli Journal of the American Chemical Society. ,vol. 124, pp. 9026- 9027 ,(2002) , 10.1021/JA027007W
Kazuko Fujiwara, Sachiko Toma, Kazuko Okamura-Ikeda, Yutaro Motokawa, Atsushi Nakagawa, Hisaaki Taniguchi, Crystal Structure of Lipoate-Protein Ligase A from Escherichia coli DETERMINATION OF THE LIPOIC ACID-BINDING SITE Journal of Biological Chemistry. ,vol. 280, pp. 33645- 33651 ,(2005) , 10.1074/JBC.M505010200
Georg Wittig, Adolf Krebs, Zur Existenz niedergliedriger Cycloalkine, I Chemische Berichte. ,vol. 94, pp. 3260- 3275 ,(1961) , 10.1002/CBER.19610941213
Shixin Ye, Caroline Köhrer, Thomas Huber, Manija Kazmi, Pallavi Sachdev, Elsa C.Y. Yan, Aditi Bhagat, Uttam L. RajBhandary, Thomas P. Sakmar, Site-specific Incorporation of Keto Amino Acids into Functional G Protein-coupled Receptors Using Unnatural Amino Acid Mutagenesis Journal of Biological Chemistry. ,vol. 283, pp. 1525- 1533 ,(2008) , 10.1074/JBC.M707355200
Monika Suchanek, Anna Radzikowska, Christoph Thiele, Photo-leucine and photo-methionine allow identification of protein-protein interactions in living cells Nature Methods. ,vol. 2, pp. 261- 267 ,(2005) , 10.1038/NMETH752