GridMACS Portal: A Grid Web Portal for Molecular Dynamics Simulation Using GROMACS

作者: Elizabeth Chia , Mohd Shahir Shamsir , Zeti Azura Hussein , Siti Zaiton Mohd Hashim , None

DOI: 10.1109/AMS.2010.103

关键词: Middleware (distributed applications)Operating systemGridComputer scienceGrid computingUsabilityServerGraphical user interfaceProof of conceptThe Internet

摘要: We developed GridMACS, a grid-enabled web portal with the aim of providing GUI for GROMACS and running molecular dynamics simulation in grid environment. The is according to basic system architecture by integrating main layers such as Gridsphere Portal Framework, Vine Toolkit (grid service) Globus middleware). integration computing resources was achieved deployment on cluster Creation this will provide based user-friendly environment that assist biologist them availability usability. GridMACS serve an initial proof concept future subsequently become platform other bioinformatics tools be implemented port let application. easily accessible via internet any browsers at www.gridmacs.fbb.utm.my:8080/gridsphere/gridsphere.

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