Detection of Cryptosporidium parvum Oocysts on Fresh Produce Using DNA Aptamers

作者: Asma Iqbal , Mahmoud Labib , Darija Muharemagic , Syed Sattar , Brent R. Dixon

DOI: 10.1371/JOURNAL.PONE.0137455

关键词: CryptosporidiumDNA AptamersDetection limitPolymerase chain reactionBiochemistryMicrobiologySystematic evolution of ligands by exponential enrichmentCryptosporidium parvumAptamerBiologyPrimer (molecular biology)

摘要: There are currently no standard methods for the detection of Cryptosporidium spp., or other protozoan parasites, in foods, and existing often inadequate, with low variable recovery efficiencies. Food testing is difficult due to concentrations difficulty eluting parasites from some lack enrichment methods, presence PCR inhibitors. The main objectives present study were obtain DNA aptamers binding oocyst wall C. parvum, use detect this parasite foods. selected against parvum oocysts using SELEX (Systematic Evolution Ligands by EXponential enrichment). Ten rounds selection led discovery 14 aptamer clones high affinities oocysts. For detecting parasite-bound aptamers, a simple electrochemical sensor was employed, which used gold nanoparticle-modified screen-printed carbon electrode. This aptasensor fabricated self-assembling hybrid thiolated ssDNA primer anti- aptamer. Square wave voltammetry employed quantitate range 150 800 oocysts, limit approximately 100 sensitivity specificity developed suggests that novel method very promising identification on spiked fresh fruits, as compared conventional such microscopy PCR.

参考文章(15)
B.R. Dixon, 13 – Transmission dynamics of foodborne parasites on fresh produce Foodborne Parasites in the Food Supply Web#R##N#Occurrence and Control. pp. 317- 353 ,(2015) , 10.1016/B978-1-78242-332-4.00013-8
Mahmoud Labib, Maxim V. Berezovski, Electrochemical Aptasensors for Microbial and Viral Pathogens Advances in Biochemical Engineering \/ Biotechnology. ,vol. 140, pp. 155- 181 ,(2013) , 10.1007/10_2013_229
Kwame Sefah, Dihua Shangguan, Xiangling Xiong, Meghan B O'Donoghue, Weihong Tan, Development of DNA aptamers using Cell-SELEX Nature Protocols. ,vol. 5, pp. 1169- 1185 ,(2010) , 10.1038/NPROT.2010.66
L. Savioli, H. Smith, A. Thompson, Giardia and Cryptosporidium join the ‘Neglected Diseases Initiative’ Trends in Parasitology. ,vol. 22, pp. 203- 208 ,(2006) , 10.1016/J.PT.2006.02.015
Rachel M. Chalmers, Frank Katzer, Looking for Cryptosporidium: the application of advances in detection and diagnosis Trends in Parasitology. ,vol. 29, pp. 237- 251 ,(2013) , 10.1016/J.PT.2013.03.001
D. A. Daniels, H. Chen, B. J. Hicke, K. M. Swiderek, L. Gold, A tenascin-C aptamer identified by tumor cell SELEX: Systematic evolution of ligands by exponential enrichment Proceedings of the National Academy of Sciences of the United States of America. ,vol. 100, pp. 15416- 15421 ,(2003) , 10.1073/PNAS.2136683100
Maxim V. Berezovski, Matthias Lechmann, Michael U. Musheev, Tak W. Mak, Sergey N. Krylov, Aptamer-Facilitated Biomarker Discovery (AptaBiD) Journal of the American Chemical Society. ,vol. 130, pp. 9137- 9143 ,(2008) , 10.1021/JA801951P
UNA RYAN, RONALD FAYER, LIHUA XIAO, Cryptosporidium species in humans and animals: current understanding and research needs Parasitology. ,vol. 141, pp. 1667- 1685 ,(2014) , 10.1017/S0031182014001085