Co-outbreak of ST37 and a novel ST3006 Klebsiella pneumoniae from multi-site infection in a neonatal intensive care unit: a retrospective study

作者: Dongjie Chen , Xinlan Hu , Falin Chen , Hongru Li , Daxuan Wang

DOI: 10.1101/334169

关键词: Pulsed-field gel electrophoresisMultilocus sequence typingIntensive careAntibiotic resistanceBiologyDrug resistanceVirulenceNeonatal intensive care unitKlebsiella pneumoniaeMicrobiology

摘要: Background: The spread of carbapenem resistance among Klebsiella pneumoniae (K. pneumoniae) is a major public health problem, particularly in neonatal intensive care units (NICUs). Aim: To describe the nosocomial co-outbreak ST37 and new sequence type ST3006 K. pneumoniae, causing catheter-related bloodstream infections NICU. Methods: Fifteen strains were isolated from seven neonates during June 3-28, 2017, tertiary hospital unit Fujian, China. Antimicrobial susceptibility was determined by Vitek 2 system micro-broth dilution method. Multi-locus typing (MLST) pulsed-field gel electrophoresis (PFGE) used to analyse genetic relatedness isolates. Genome sequencing gene function analyses performed for investigating pathogenicity drug screening genomic islands. Findings: Two clones identified with multi-site infection, one strain ST3006. testing revealed that exhibited multi-drug resistance. only resistant ampicillin-sulbactam, cefazolin, ceftriaxone. MLST PFGE showed 15 divided into three groups, high level homology. Gene analysis indicated KPN1343 harboured 12 genes, islands 205 reduced virulence genes. KPN1344 four 19 209 Conclusion: Co-outbreak involved two clones, ST36 ST3006, infection. an effective method studying bacterial genes their functions.

参考文章(31)
K. Nakamura, M. Kaneko, Y. Abe, N. Yamamoto, H. Mori, A. Yoshida, K. Ohashi, S. Miura, T.T. Yang, N. Momoi, K. Kanemitsu, Outbreak of extended-spectrum β-lactamase-producing Escherichia coli transmitted through breast milk sharing in a neonatal intensive care unit. Journal of Hospital Infection. ,vol. 92, pp. 42- 46 ,(2016) , 10.1016/J.JHIN.2015.05.002
Tommaso Giani, Fabio Arena, Guendalina Vaggelli, Viola Conte, Adriana Chiarelli, Lucia Henrici De Angelis, Rossella Fornaini, Maddalena Grazzini, Fabrizio Niccolini, Patrizia Pecile, Gian Maria Rossolini, Large nosocomial outbreak of colistin-resistant, carbapenemase-producing klebsiella pneumoniae traced to clonal expansion of an mgrb deletion mutant Journal of Clinical Microbiology. ,vol. 53, pp. 3341- 3344 ,(2015) , 10.1128/JCM.01017-15
Jiong Zhou, Guiping Li, Xiaojun Ma, Qiwen Yang, Jie Yi, Outbreak of colonization by carbapenemase-producing Klebsiella pneumoniae in a neonatal intensive care unit: Investigation, control measures and assessment American Journal of Infection Control. ,vol. 43, pp. 1122- 1124 ,(2015) , 10.1016/J.AJIC.2015.05.038
F. Arena, T. Giani, E. Becucci, V. Conte, G. Zanelli, M. M. D'Andrea, G. Buonocore, F. Bagnoli, A. Zanchi, F. Montagnani, G. M. Rossolini, Large Oligoclonal Outbreak Due to Klebsiella pneumoniae ST14 and ST26 Producing the FOX-7 AmpC β-Lactamase in a Neonatal Intensive Care Unit Journal of Clinical Microbiology. ,vol. 51, pp. 4067- 4072 ,(2013) , 10.1128/JCM.01982-13
Chesley Richards, Juan Alonso-Echanove, Yolanda Caicedo, William R. Jarvis, KLEBSIELLA PNEUMONIAE BLOODSTREAM INFECTIONS AMONG NEONATES IN A HIGH-RISK NURSERY IN CALI, COLOMBIA Infection Control and Hospital Epidemiology. ,vol. 25, pp. 221- 225 ,(2004) , 10.1086/502382
Elena Ruiz, Beatriz Rojo-Bezares, Yolanda Sáenz, Inés Olarte, Inés Esteban, Rosa Rocha-Gracia, Myriam Zarazaga, Carmen Torres, Outbreak caused by a multi-resistant Klebsiella pneumoniae strain of new sequence type ST341 carrying new genetic environments of aac(6')-Ib-cr and qnrS1 genes in a neonatal intensive care unit in Spain. International Journal of Medical Microbiology. ,vol. 300, pp. 464- 469 ,(2010) , 10.1016/J.IJMM.2010.04.014
L. Diancourt, V. Passet, J. Verhoef, P. A. D. Grimont, S. Brisse, Multilocus Sequence Typing of Klebsiella pneumoniae Nosocomial Isolates Journal of Clinical Microbiology. ,vol. 43, pp. 4178- 4182 ,(2005) , 10.1128/JCM.43.8.4178-4182.2005
Nieves Seara, Jesús Oteo, Raquel Carrillo, Veronica Perez-Blanco, Jesus Mingorance, Rosa Gomez-Gil, Rafael Herruzo, Maria Perez-Vazquez, Jenaro Astray, Julio Garcia-Rodriguez, Luis Moisés Ruiz-Velasco, Jose Campos, Carmen de Burgos, Guillermo Ruiz-Carrascoso, None, Interhospital spread of NDM-7-producing Klebsiella pneumoniae belonging to ST437 in Spain International Journal of Antimicrobial Agents. ,vol. 46, pp. 169- 173 ,(2015) , 10.1016/J.IJANTIMICAG.2015.04.001
Elizabeth Diago-Navarro, Liang Chen, Virginie Passet, Seth Burack, Amaia Ulacia-Hernando, Rosy Priya Kodiyanplakkal, Michael H. Levi, Sylvain Brisse, Barry N. Kreiswirth, Bettina C. Fries, Carbapenem-Resistant Klebsiella pneumoniae Exhibit Variability in Capsular Polysaccharide and Capsule Associated Virulence Traits The Journal of Infectious Diseases. ,vol. 210, pp. 803- 813 ,(2014) , 10.1093/INFDIS/JIU157