Global impact of diet and temperature over aquaculture of Octopus vulgaris paralarvae from a transcriptomic approach.

作者: P. García-Fernández , M. Prado-Alvarez , M. Nande , D. Garcia de la serrana , C. Perales-Raya

DOI: 10.1038/S41598-019-46492-2

关键词: CephalopodAquacultureCommon octopusZoologyOctopus (genus)BiologyTranscriptomeJuvenileGeneKEGG

摘要: Common octopus, Octopus vulgaris, is an economically important cephalopod species. However, its rearing under captivity currently challenged by massive mortalities previous to their juvenile stage due nutritional and environmental factors. Dissecting the genetic basis regulatory mechanism behind this mortality requires genomic background knowledge. A transcriptomic sequencing of 10 dph octopus paralarvae from different experimental conditions was constructed via RNA-seq. total 613,767,530 raw reads were filtered de novo assembled into 363,527 contigs which 82,513 annotated in UniProt carrying also GO KEGG information. Differential gene expression analysis carried out on reared diet regimes temperatures, including wild paralarvae. Genes related lipid metabolism exhibited higher transcriptional levels individuals whose includes crustacean zoeas, had impact over development immune response capability. High temperature induces acclimation processes at time that increase metabolic demands oxidative stress. Wild show profile unexpectedly similar Artemia fed individuals. Proteomic results support hypothesis revealed analysis. The comparative study O. vulgaris profiles allowed identification genes deserve be further studied as candidates for biomarkers health. obtained here variations caused will provide new perspectives understanding molecular mechanisms requirements common open opportunities deepen requirements.

参考文章(100)
Lorena Olmos-Pérez, Álvaro Roura, Graham J. Pierce, Stéphane Boyer, Ángel F. González, Diet Composition and Variability of Wild Octopus vulgaris and Alloteuthis media (Cephalopoda) Paralarvae: a Metagenomic Approach. Frontiers in Physiology. ,vol. 8, pp. 321- ,(2017) , 10.3389/FPHYS.2017.00321
Kuo Tian, Fangrui Lou, Tianxiang Gao, Yongdong Zhou, Zhenqing Miao, Zhiqiang Han, De novo assembly and annotation of the whole transcriptome of Sepiella maindroni Marine Genomics. ,vol. 38, pp. 13- 16 ,(2017) , 10.1016/J.MARGEN.2017.06.004
Li Bian, Changlin Liu, Siqing Chen, Fazhen Zhao, Jianlong Ge, Jie Tan, Transcriptome analysis of gene expression patterns during embryonic development in golden cuttlefish (Sepia esculenta) Genes & Genomics. ,vol. 40, pp. 253- 263 ,(2018) , 10.1007/S13258-017-0588-6
Vittoria Roncalli, Andrew E. Christie, Stephanie A. Sommer, Matthew C. Cieslak, Daniel K. Hartline, Petra H. Lenz, A deep transcriptomic resource for the copepod crustacean Labidocera madurae: A potential indicator species for assessing near shore ecosystem health. PLOS ONE. ,vol. 12, pp. 0186794- ,(2017) , 10.1371/JOURNAL.PONE.0186794
Marcella Sabino, Stefano Capomaccio, Katia Cappelli, Andrea Verini-Supplizi, Lorenzo Bomba, Paolo Ajmone-Marsan, Gabriella Cobellis, Oliviero Olivieri, Camillo Pieramati, Massimo Trabalza-Marinucci, Oregano dietary supplementation modifies the liver transcriptome profile in broilers: RNASeq analysis. Research in Veterinary Science. ,vol. 117, pp. 85- 91 ,(2018) , 10.1016/J.RVSC.2017.11.009
Alyson Sujkowski, Divya Ramesh, Axel Brockmann, Robert Wessells, Octopamine Drives Endurance Exercise Adaptations in Drosophila. Cell Reports. ,vol. 21, pp. 1809- 1823 ,(2017) , 10.1016/J.CELREP.2017.10.065
Hanna M. Butler-Struben, Samantha M. Brophy, Nasira A. Johnson, Robyn J. Crook, In Vivo Recording of Neural and Behavioral Correlates of Anesthesia Induction, Reversal, and Euthanasia in Cephalopod Molluscs. Frontiers in Physiology. ,vol. 9, pp. 109- 109 ,(2018) , 10.3389/FPHYS.2018.00109
Guillaume Drillet, Kristian Syberg, Per Meyer Jepsen, Benni Winding Hansen, Planktonic Crustacean Culture - Live Planktonic Crustaceans as Live Feed for Finfish and Shrimps in Aquaculture Oxford University Press. ,(2020)