Characterisation of dihydrodipicolinate synthase (DHDPS) from Bacillus anthracis.

作者: L.J. Domigan , S.W. Scally , M.J. Fogg , C.A. Hutton , M.A. Perugini

DOI: 10.1016/J.BBAPAP.2009.06.020

关键词: MicrobiologyBiochemistryEnzyme kineticsSubstrate (chemistry)Escherichia coliBacteriaBiologyDihydrodipicolinate synthaseIsothermal titration calorimetryBacillus anthracisEnzyme

摘要: Abstract Bacillus anthracis is a Gram-positive spore-forming bacterium that the causative agent of anthrax disease. The use as bioweapon has increased pressure for development an effective treatment. Dihydrodipicolinate synthase (DHDPS) catalyses first committed step in biosynthetic pathway yielding two essential bacterial metabolites, meso-diaminopimelate (DAP) and (S)-lysine. DHDPS therefore potential antibiotic target, microbes require either lysine or DAP component cell wall. This paper biochemical description from B. anthracis. Enzyme kinetic analyses, isothermal titration calorimetry (ITC), mass spectrometry differential scanning fluorimetry (DSF) were used to characterise compare it with well characterised Escherichia coli enzyme. exhibited different behaviour compared E. DHDPS, particular, substrate inhibition by (S)-aspartate semi-aldehyde was observed enzyme (Ksi(ASA) = 5.4 ± 0.5 mM), but not As predicted comparison X-ray crystal structures, inhibited lysine. thermally stabilised substrate, pyruvate, greater extent than its counterpart, weaker affinity pyruvate based on kinetics ITC studies. characterisation will provide useful information design inhibitors new antibiotics targeting

参考文章(44)
Yasumi Yugari, Charles Gilvarg, The condensation step in diaminopimelate synthesis. Journal of Biological Chemistry. ,vol. 240, pp. 4710- 4716 ,(1965) , 10.1016/S0021-9258(18)97013-4
Renwick C. J. DOBSON, Juliet A. GERRARD, F. Grant PEARCE, Dihydrodipicolinate synthase is not inhibited by its substrate, (S)-aspartate beta-semialdehyde. Biochemical Journal. ,vol. 377, pp. 757- 762 ,(2004) , 10.1042/BJ20031389
L.W.J. Baillie, Past, imminent and future human medical countermeasures for anthrax Journal of Applied Microbiology. ,vol. 101, pp. 594- 606 ,(2006) , 10.1111/J.1365-2672.2006.03112.X
Craig A. Hutton, Matthew A. Perugini, Juliet A. Gerrard, Inhibition of lysine biosynthesis: an evolving antibiotic strategy Molecular BioSystems. ,vol. 3, pp. 458- 465 ,(2007) , 10.1039/B705624A
Pui Hang Tam, Christopher P. Phenix, David R.J. Palmer, MosA, a protein implicated in rhizopine biosynthesis in Sinorhizobium meliloti L5-30, is a dihydrodipicolinate synthase. Journal of Molecular Biology. ,vol. 335, pp. 393- 397 ,(2004) , 10.1016/J.JMB.2003.10.063
Joel Tellinghuisen, Isothermal titration calorimetry at very low c. Analytical Biochemistry. ,vol. 373, pp. 395- 397 ,(2008) , 10.1016/J.AB.2007.08.039
Frank H Niesen, Helena Berglund, Masoud Vedadi, The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability Nature Protocols. ,vol. 2, pp. 2212- 2221 ,(2007) , 10.1038/NPROT.2007.321
Renwick C. J. Dobson, Michael D. W. Griffin, Geoffrey B. Jameson, Juliet A. Gerrard, The crystal structures of native and (S)-lysine-bound dihydrodipicolinate synthase from Escherichia coli with improved resolution show new features of biological significance. Acta Crystallographica Section D-biological Crystallography. ,vol. 61, pp. 1116- 1124 ,(2005) , 10.1107/S0907444905016318