DArT for high-throughput genotyping of Cassava (Manihot esculenta) and its wild relatives.

作者: Ling Xia , Kaiman Peng , Shiying Yang , Peter Wenzl , M. Carmen de Vicente

DOI: 10.1007/S00122-005-1937-4

关键词: Diversity Arrays TechnologyGenetic markerGene poolManihotGermplasmGenetic diversityBiologyGeneticsGenetic variationGenotyping

摘要: Understanding the distribution of genetic diversity within and among individuals, populations, species and gene pools is crucial for the efficient management of germplasm collections. …

参考文章(17)
Paul Chavarriaga-Aguirre, María M. Maya, Joe Tohme, Myriam C. Duque, Carlos Iglesias, Merideth W. Bonierbale, Steve Kresovich, Gary Kochert, Using microsatellites, isozymes and AFLPs to evaluate genetic diversity and redundancy in the cassava core collection and to assess the usefulness of DNA-based markers to maintain germplasm collections Molecular Breeding. ,vol. 5, pp. 263- 273 ,(1999) , 10.1023/A:1009627231450
Michael P. Cummings, PHYLIP (Phylogeny Inference Package) Dictionary of Bioinformatics and Computational Biology. ,(2004) , 10.1002/0471650129.DOB0534
Masatoshi Nei, Wen-Hsiung Li, Mathematical model for studying genetic variation in terms of restriction endonucleases Proceedings of the National Academy of Sciences of the United States of America. ,vol. 76, pp. 5269- 5273 ,(1979) , 10.1073/PNAS.76.10.5269
Stephen L. Dellaporta, Jonathan Wood, James B. Hicks, A plant DNA minipreparation: Version II Plant Molecular Biology Reporter. ,vol. 1, pp. 19- 21 ,(1983) , 10.1007/BF02712670
M. Fregene, A. Bernal, M. Duque, A. Dixon, J. Tohme, AFLP analysis of African cassava (Manihot esculenta Crantz) germplasm resistant to the cassava mosaic disease (CMD) Theoretical and Applied Genetics. ,vol. 100, pp. 678- 685 ,(2000) , 10.1007/S001220051339
F. Awoleye, M. van Duren, J. Dolezel, F. J. Novak, Nuclear DNA content and in vitro induced somatic polyploidization cassava ( Manihot esculenta Crantz) breeding Euphytica. ,vol. 76, pp. 195- 202 ,(1994) , 10.1007/BF00022164
A.C Bellotti, B Arias, Host plant resistance to whiteflies with emphasis on cassava as a case study Crop Protection. ,vol. 20, pp. 813- 823 ,(2001) , 10.1016/S0261-2194(01)00113-2
M. A. Fregene, M. Suarez, J. Mkumbira, H. Kulembeka, E. Ndedya, A. Kulaya, S. Mitchel, U. Gullberg, H. Rosling, A. G. O. Dixon, R. Dean, S. Kresovich, Simple sequence repeat marker diversity in cassava landraces: genetic diversity and differentiation in an asexually propagated crop Theoretical and Applied Genetics. ,vol. 107, pp. 1083- 1093 ,(2003) , 10.1007/S00122-003-1348-3
J. A. Anderson, G. A. Churchill, J. E. Autrique, S. D. Tanksley, M. E. Sorrells, Optimizing parental selection for genetic linkage maps. Genome. ,vol. 36, pp. 181- 186 ,(1993) , 10.1139/G93-024
P. Wenzl, J. Carling, D. Kudrna, D. Jaccoud, E. Huttner, A. Kleinhofs, A. Kilian, Diversity Arrays Technology (DArT) for whole-genome profiling of barley Proceedings of the National Academy of Sciences of the United States of America. ,vol. 101, pp. 9915- 9920 ,(2004) , 10.1073/PNAS.0401076101