Informative structure priors: joint learning of dynamic regulatory networks from multiple types of data.

作者: ALLISTER BERNARD , ALEXANDER J. HARTEMINK

DOI: 10.1142/9789812702456_0044

关键词: Data typeMachine learningExperimental dataJoint (audio engineering)Dynamic Bayesian networkComputer scienceStructure (mathematical logic)Isolation (database systems)InferencePrior probabilityData miningArtificial intelligence

摘要: We present a method for jointly learning dynamic models of transcriptional regulatory networks from gene expression data and transcription factor binding location data. Models are automatically learned using Bayesian network inference algorithms; joint is accomplished by incorporating evidence through the likelihood, prior. propose new informative structure prior with two advantages. First, incorporates probabilistically, allowing it to be weighed against Second, takes on factorable form that computationally efficient when networks. Results obtained both simulated experimental yeast cell cycle demonstrate this algorithm can recover multiple types more accurate than those recovered each type in isolation.

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