MicroRNA signature associated with osteogenic lineage commitment

作者: Behnaz Bakhshandeh , Masoud Soleimani , Maryam Hafizi , Seyed Hassan Paylakhi , Nasser Ghaemi

DOI: 10.1007/S11033-012-1591-2

关键词: Cell biologyTransforming growth factor betamicroRNAWnt signaling pathwayBiologyStem cellIn silicoCellular differentiationCell typeAdult stem cellBioinformatics

摘要: Cell-based approaches offer a potential therapeutic strategy for appropriate bone manufacturing. Capable of differentiating into multiple cell types especially osteoblasts spontaneously, unrestricted somatic stem (USSC) seems to be suitable candidate. Recent studies have shown the involvement microRNAs in several biological processes. miRNA microarray profiling was applied order identify osteo-specific signature. Prior this analysis, osteogenic commitment evaluated by measuring ALPase activity, biomineralization, specific staining and evaluation some main marker genes. To support our findings, various silico explorations (for both putative targets signaling pathways) empirical analyses (miRNA transfections followed qPCR indicators activity measurement) were carried out. The function GSK-3b inhibitor also studied investigate role WNT osteogenesis. Transient modulation osteo-miRs (such as mir-199b, 1274a, 30b) with common BMPR, TCFs, SMADs) mediators pathways including cell-cell interactions, TGF-beta pathways, suggests mechanism rapid induction osteogenesis an anti-miRNA therapy. results research identified signature which regulates USSC. conclude, study reveals more details about allocation USSCs lineage through modulatory effect miRNAs on required creating tissue-specific phenotype may aid future clinical interventions.

参考文章(59)
Mark F Pittenger, Alastair M Mackay, Stephen C Beck, Rama K Jaiswal, Robin Douglas, Joseph D Mosca, Mark A Moorman, Donald W Simonetti, Stewart Craig, Daniel R Marshak, Multilineage Potential of Adult Human Mesenchymal Stem Cells Science. ,vol. 284, pp. 143- 147 ,(1999) , 10.1126/SCIENCE.284.5411.143
Robert C Gentleman, Vincent J Carey, Douglas M Bates, Ben Bolstad, Marcel Dettling, Sandrine Dudoit, Byron Ellis, Laurent Gautier, Yongchao Ge, Jeff Gentry, Kurt Hornik, Torsten Hothorn, Wolfgang Huber, Stefano Iacus, Rafael Irizarry, Friedrich Leisch, Cheng Li, Martin Maechler, Anthony J Rossini, Gunther Sawitzki, Colin Smith, Gordon Smyth, Luke Tierney, Jean YH Yang, Jianhua Zhang, None, Bioconductor: open software development for computational biology and bioinformatics Genome Biology. ,vol. 5, pp. 1- 16 ,(2004) , 10.1186/GB-2004-5-10-R80
Jiaqiang Ren, Ping Jin, Ena Wang, Francesco M Marincola, David F Stroncek, MicroRNA and gene expression patterns in the differentiation of human embryonic stem cells. Journal of Translational Medicine. ,vol. 7, pp. 20- 20 ,(2009) , 10.1186/1479-5876-7-20
Jie He, Jin-fang Zhang, Can Yi, Qing Lv, Wei-dong Xie, Jian-na Li, Gang Wan, Kai Cui, Hsiang-fu Kung, Jennifer Yang, Burton B. Yang, Yaou Zhang, miRNA-Mediated Functional Changes through Co-Regulating Function Related Genes PLoS ONE. ,vol. 5, pp. e13558- ,(2010) , 10.1371/JOURNAL.PONE.0013558
V. Narry Kim, Jin-Wu Nam, Genomics of microRNA Trends in Genetics. ,vol. 22, pp. 165- 173 ,(2006) , 10.1016/J.TIG.2006.01.003
A. Sturn, J. Quackenbush, Z. Trajanoski, Genesis: cluster analysis of microarray data Bioinformatics. ,vol. 18, pp. 207- 208 ,(2002) , 10.1093/BIOINFORMATICS/18.1.207
Annalisa Palmieri, Furio Pezzetti, Giorgio Brunelli, Marcella Martinelli, Luca Scapoli, Marzia Arlotti, Elena Masiero, Francesco Carinci, Medpor regulates osteoblast's microRNAs. Bio-medical Materials and Engineering. ,vol. 18, pp. 91- 97 ,(2008) , 10.3233/BME-2008-0512
Timothy S. Davison, Charles D. Johnson, Bernard F. Andruss, Analyzing micro-RNA expression using microarrays. Methods in Enzymology. ,vol. 411, pp. 14- 34 ,(2006) , 10.1016/S0076-6879(06)11002-2