ConSeq: the identification of functionally and structurally important residues in protein sequences

作者: C. Berezin , F. Glaser , J. Rosenberg , I. Paz , T. Pupko

DOI: 10.1093/BIOINFORMATICS/BTH070

关键词: Function (biology)Amino acidSolvent accessibilityComputational biologyIdentification (biology)Protein coreBiologyFunctional importanceBiochemistry

摘要: Motivation: ConSeq is a web server for the identification of biologically important residues in protein sequences. Functionally that take part, e.g. ligand binding and protein--protein interactions, are often evolutionarily conserved most likely to be solvent-accessible, whereas within core probably have an structural role maintaining protein's fold. Thus, estimated evolutionary rates, as well relative solvent accessibility predictions, assigned each amino acid sequence; both subsequently used indicate potential or functional importance. Availability: The available at http://conseq.bioinfo.tau.ac.il/ Supplementary information: methodology, description its performance set five well-documented proteins, comparison other methods, outcome application 111 proteins unknown function, presented http://conseq.bioinfo.tau.ac.il/ under 'OVERVIEW', 'VALIDATION', 'COMPARISON' 'PREDICTIONS', respectively.

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