Partial Hepatectomy Induced Long Noncoding RNA Inhibits Hepatocyte Proliferation during Liver Regeneration

作者: Lulu Huang , Sagar S. Damle , Sheri Booten , Priyam Singh , Mahyar Sabripour

DOI: 10.1371/JOURNAL.PONE.0132798

关键词: Microarray analysis techniquesLiver regenerationMolecular biologyAntisense RNADownregulation and upregulationLong non-coding RNAGene expressionTranscription factorBiologyHepatocyte

摘要: Liver regeneration after partial hepatectomy (PHx) is a complex and well-orchestrated biological process in which synchronized cell proliferation induced response to the loss of liver mass. To define long noncoding RNAs (lncRNAs) that participate regulation regeneration, we performed microarray analysis identified more than 400 lncRNAs exhibiting significantly altered expression. Of these, one lncRNA, LncPHx2 (Long RNA by PHx 2), was highly upregulated during regeneration. Depletion using antisense oligonucleotides led transient increase hepatocyte rapid Gene expression showed depletion resulted upregulation mRNAs encoding proteins known promote proliferation, including MCM components, DNA polymerases, histone proteins, transcription factors. interacts with making it candidate regulate MCMs other genes post-transcriptionally. Collectively, our data demonstrate key lncRNA participates negative feedback loop modulating through RNA-RNA interactions.

参考文章(49)
George K. Michalopoulos, Liver Regeneration after Partial Hepatectomy: Critical Analysis of Mechanistic Dilemmas American Journal of Pathology. ,vol. 176, pp. 2- 13 ,(2010) , 10.2353/AJPATH.2010.090675
Xuefeng Liu, Dan Li, Weimin Zhang, Mingzhou Guo, Qimin Zhan, Long non-coding RNA gadd7 interacts with TDP-43 and regulates Cdk6 mRNA decay. The EMBO Journal. ,vol. 31, pp. 4415- 4427 ,(2012) , 10.1038/EMBOJ.2012.292
Yolanda Sánchez, Maite Huarte, Long non-coding RNAs: challenges for diagnosis and therapies. Nucleic Acid Therapeutics. ,vol. 23, pp. 15- 20 ,(2013) , 10.1089/NAT.2012.0414
Tony Gutschner, Sven Diederichs, The hallmarks of cancer: a long non-coding RNA point of view. RNA Biology. ,vol. 9, pp. 703- 719 ,(2012) , 10.4161/RNA.20481
Yuen-Yi Tseng, Branden S. Moriarity, Wuming Gong, Ryutaro Akiyama, Ashutosh Tiwari, Hiroko Kawakami, Peter Ronning, Brian Reuland, Kacey Guenther, Thomas C. Beadnell, Jaclyn Essig, George M. Otto, M. Gerard O’Sullivan, David A. Largaespada, Kathryn L. Schwertfeger, York Marahrens, Yasuhiko Kawakami, Anindya Bagchi, PVT1 dependence in cancer with MYC copy-number increase Nature. ,vol. 512, pp. 82- 86 ,(2014) , 10.1038/NATURE13311
Domenico Maiorano, Malik Lutzmann, Marcel Méchali, MCM proteins and DNA replication Current Opinion in Cell Biology. ,vol. 18, pp. 130- 136 ,(2006) , 10.1016/J.CEB.2006.02.006
Graeme D. Penny, Graham F. Kay, Steven A. Sheardown, Sohaila Rastan, Neil Brockdorff, Requirement for Xist in X chromosome inactivation Nature. ,vol. 379, pp. 131- 137 ,(1996) , 10.1038/379131A0
Guobin He, Debanjan Dhar, Hayato Nakagawa, Joan Font-Burgada, Hisanobu Ogata, Yuhong Jiang, Shabnam Shalapour, Ekihiro Seki, Shawn E. Yost, Kristen Jepsen, Kelly A. Frazer, Olivier Harismendy, Maria Hatziapostolou, Dimitrios Iliopoulos, Atsushi Suetsugu, Robert M. Hoffman, Ryosuke Tateishi, Kazuhiko Koike, Michael Karin, Identification of Liver Cancer Progenitors Whose Malignant Progression Depends on Autocrine IL-6 Signaling Cell. ,vol. 155, pp. 384- 396 ,(2013) , 10.1016/J.CELL.2013.09.031
Rebecca Taub, Liver regeneration: from myth to mechanism Nature Reviews Molecular Cell Biology. ,vol. 5, pp. 836- 847 ,(2004) , 10.1038/NRM1489
Sonsoles Hortelano, Miriam Zeini, Marta Casado, Paloma Martín-Sanz, Lisardo Boscá, Animal models for the study of liver regeneration: role of nitric oxide and prostaglandins Frontiers in Bioscience. ,vol. 12, pp. 13- 21 ,(2007) , 10.2741/2045