Can phylogenetics identify C4 origins and reversals

作者: Pascal-Antoine Christin , Rob P. Freckleton , Colin P. Osborne

DOI: 10.1016/J.TREE.2010.04.007

关键词: TraitPhylogeneticsBiologyEvolutionary biologyAdaptive traitsBiological evolutionEcologyStatistical modelEvolutionary transitionsPhylogenetic tree

摘要: Determining the direction of past transitions between adaptive traits is one major objectives evolutionary biology. Insights can be gained from phylogenies, but violation assumptions statistical models used to reconstruct result in severe biases and complementary evidence should considered. Here, we review weaknesses relying solely on species phylogenies reconstructing history C 4 photosynthesis grasses, a complex trait present distinct phylogenetic groups. We argue that reconstructed by establishing homology or convergence different states based genetic phenotypic analyses. Such an approach points predominance gains over reversals 3 discuss potential explanations for this asymmetry transition rates.

参考文章(63)
Ruairidh JH Sawers, Peng Liu, Katya Anufrikova, JT Gene Hwang, Thomas P Brutnell, A multi-treatment experimental system to examine photosynthetic differentiation in the maize leaf. BMC Genomics. ,vol. 8, pp. 12- 12 ,(2007) , 10.1186/1471-2164-8-12
L. Watson, G. P. Chapman, P. W. Hattersley, Diversification of photosynthesis. Grass evolution and domestication.. pp. 38- 116 ,(1992)
R. F. Sage, T. L. Sage, R. W. Pearcy, T. Borsch, The taxonomic distribution of C4 photosynthesis in Amaranthaceae sensu stricto. American Journal of Botany. ,vol. 94, pp. 1992- 2003 ,(2007) , 10.3732/AJB.94.12.1992
Pascal-Antoine Christin, Nicolas Salamin, Vincent Savolainen, Melvin R. Duvall, Guillaume Besnard, C4 Photosynthesis Evolved in Grasses via Parallel Adaptive Genetic Changes Current Biology. ,vol. 17, pp. 1241- 1247 ,(2007) , 10.1016/J.CUB.2007.06.036
Douglas G. Ibrahim, Terry Burke, Brad S. Ripley, Colin P. Osborne, A molecular phylogeny of the genus Alloteropsis (Panicoideae, Poaceae) suggests an evolutionary reversion from C4 to C3 photosynthesis Annals of Botany. ,vol. 103, pp. 127- 136 ,(2009) , 10.1093/AOB/MCN204
P. W. Hattersley, Suan-Chin Wong, S. Perry, Z. Roksandic, Comparative ultrastructure and gas exchange characteristics of the C3–C4 intermediate Neurachne minor S. T. Blake (Poaceae) Plant Cell and Environment. ,vol. 9, pp. 217- 233 ,(1986) , 10.1111/1365-3040.EP11611656
Colin P. Osborne, Robert P. Freckleton, Ecological selection pressures for C4 photosynthesis in the grasses. Proceedings of The Royal Society B: Biological Sciences. ,vol. 276, pp. 1753- 1760 ,(2009) , 10.1098/RSPB.2008.1762
G. Kadereit, T. Borsch, K. Weising, H. Freitag, Phylogeny of Amaranthaceae and Chenopodiaceae and the evolution of C4 photosynthesis. International Journal of Plant Sciences. ,vol. 164, pp. 959- 986 ,(2003) , 10.1086/378649