Virulence and resistance genes profiles and clonal relationships of non-typhoidal food-borne Salmonella strains isolated in Tunisia by whole genome sequencing
作者： Amal Ben Hassena , Julie Haendiges , Sonia Zormati , Sonda Guermazi , Radhouane Gdoura
DOI: 10.1016/J.IJFOODMICRO.2020.108941
关键词: Virulence 、 Salmonella 、 Genetics 、 Biology 、 Multilocus sequence typing 、 Phylogenetics 、 Whole genome sequencing 、 Gene 、 Phylogenetic tree 、 Genome 、 Food science 、 Microbiology 、 General Medicine
摘要: Whole genome sequencing (WGS) has made impressive progress in the field of molecular biology. Its most common application for public health is in the area of surveillance of food-borne diseases. WGS has the potential for providing a large amount of information, such as the identification of the strain type, the characterization of antibiotic resistance and virulence, and phylogeny. In our study, thirty-nine non-typhoidal Salmonella strains were isolated from diverse sources in Tunisia. Non-typhoidal Salmonella are among the most common …
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