Reductive evolution suggested from the complete genome sequence of a plant-pathogenic phytoplasma

作者: Kenro Oshima , Shigeyuki Kakizawa , Hisashi Nishigawa , Hee-Young Jung , Wei Wei

DOI: 10.1038/NG1277

关键词: GeneIntracellular parasiteWhole genome sequencingObligatePathogenMycoplasmaPhytoplasmaBiologyGenomeGenetics

摘要: The minimal gene set essential for life has long been sought. We report the 860-kb genome of obligate intracellular plant pathogen phytoplasma (Candidatus Phytoplasma asteris, OY strain). encodes even fewer metabolic functions than do mycoplasma genomes. It lacks pentose phosphate cycle and, more unexpectedly, ATP-synthase subunits, which are thought to be life. This may result reductive evolution as a consequence an parasite in nutrient-rich environment.

参考文章(16)
Siv G. E. Andersson, Alireza Zomorodipour, Jan O. Andersson, Thomas Sicheritz-Pontén, U. Cecilia M. Alsmark, Raf M. Podowski, A. Kristina Näslund, Ann-Sofie Eriksson, Herbert H. Winkler, Charles G. Kurland, The genome sequence of Rickettsia prowazekii and the origin of mitochondria Nature. ,vol. 396, pp. 133- 140 ,(1998) , 10.1038/24094
M Santana, M S Ionescu, A Vertes, R Longin, F Kunst, A Danchin, P Glaser, Bacillus subtilis F0F1 ATPase: DNA sequence of the atp operon and characterization of atp mutants. Journal of Bacteriology. ,vol. 176, pp. 6802- 6811 ,(1994) , 10.1128/JB.176.22.6802-6811.1994
Kenro OSHIMA, Shin-ichi MIYATA, Toshimi SAWAYANAGI, Shigeyuki KAKIZAWA, Hisashi NISHIGAWA, Hee-Young JUNG, Ken-ichiro FURUKI, Masaki YANAZAKI, Shiho SUZUKI, Wei WEI, Tsutomu KUBOYAMA, Masashi UGAKI, Shigetou NAMBA, Minimal Set of Metabolic Pathways Suggested from the Genome of Onion Yellows Phytoplasma Journal of General Plant Pathology. ,vol. 68, pp. 225- 236 ,(2002) , 10.1007/PL00013081
Jennifer J. Wernegreen, Genome evolution in bacterial endosymbionts of insects. Nature Reviews Genetics. ,vol. 3, pp. 850- 861 ,(2002) , 10.1038/NRG931
C. M. Fraser, J. D. Gocayne, O. White, M. D. Adams, R. A. Clayton, R. D. Fleischmann, C. J. Bult, A. R. Kerlavage, G. Sutton, J. M. Kelley, J. L. Fritchman, J. F. Weidman, K. V. Small, M. Sandusky, J. Fuhrmann, D. Nguyen, T. R. Utterback, D. M. Saudek, C. A. Phillips, J. M. Merrick, J.-F. Tomb, B. A. Dougherty, K. F. Bott, P.-C. Hu, T. S. Lucier, The minimal gene complement of Mycoplasma genitalium Science. ,vol. 270, pp. 397- 403 ,(1995) , 10.1126/SCIENCE.270.5235.397
A. R. Mushegian, E. V. Koonin, A minimal gene set for cellular life derived by comparison of complete bacterial genomes Proceedings of the National Academy of Sciences of the United States of America. ,vol. 93, pp. 10268- 10273 ,(1996) , 10.1073/PNAS.93.19.10268
Kenro Oshima, Toshiki Shiomi, Tsutomu Kuboyama, Toshimi Sawayanagi, Hisashi Nishigawa, Shigeyuki Kakizawa, Shin-ichi Miyata, Masashi Ugaki, Shigetou Namba, Isolation and Characterization of Derivative Lines of the Onion Yellows Phytoplasma that Do Not Cause Stunting or Phloem Hyperplasia. Phytopathology. ,vol. 91, pp. 1024- 1029 ,(2001) , 10.1094/PHYTO.2001.91.11.1024
M. A. Van Sluys, C. B. Monteiro-Vitorello, L. E. A. Camargo, C. F. M. Menck, A. C. R. da Silva, J. A. Ferro, M. C. Oliveira, J. C. Setubal, J. P. Kitajima, A. J. Simpson, Comparative genomic analysis of plant-associated bacteria. Annual Review of Phytopathology. ,vol. 40, pp. 169- 189 ,(2002) , 10.1146/ANNUREV.PHYTO.40.030402.090559
Shmuel Razin, David Yogev, Yehudith Naot, Molecular Biology and Pathogenicity of Mycoplasmas Microbiology and Molecular Biology Reviews. ,vol. 62, pp. 1094- 1156 ,(1998) , 10.1128/MMBR.62.4.1094-1156.1998
Ing-Ming Lee, Robert E. Davis, Dawn E. Gundersen-Rindal, Phytoplasma: phytopathogenic mollicutes. Annual Review of Microbiology. ,vol. 54, pp. 221- 255 ,(2000) , 10.1146/ANNUREV.MICRO.54.1.221