Tools for Molecular Graphics Depictions of Lipid Structures

作者: Bruce Paul Gaber , David C. Turner , Krishnan Namboodiri , William R. Light , Albert Hybl

DOI: 10.1007/978-3-0348-7454-0_4

关键词: Crystallographic dataAcyl chainHyperCardComputer graphics (images)NanotechnologyVisualizationLipid structureProtein Data BankLipid bilayerComputer scienceMolecular graphics

摘要: We have developed several tools for the molecular graphics depiction of lipids and their microstructures. These include: 1) NanoVision, a visualization program Macintosh personal computers; 2) NRLipid, HyperCard database lipid structural information; 3) BILAYER BUILDER, constructing models bilayers from crystallographic data; 4) Ribbon Representation, an adaptation subtle acyl chain structure display tool commonly used proteins.

参考文章(6)
Frances C. Bernstein, Thomas F. Koetzle, Graheme J.B. Williams, Edgar F. Meyer, Michael D. Brice, John R. Rodgers, Olga Kennard, Takehiko Shimanouchi, Mitsuo Tasumi, The Protein Data Bank: a computer-based archival file for macromolecular structures. Journal of Molecular Biology. ,vol. 112, pp. 535- 542 ,(1977) , 10.1016/S0022-2836(77)80200-3
J. P. Priestle, RIBBON: a stereo cartoon drawing program for proteins Journal of Applied Crystallography. ,vol. 21, pp. 572- 576 ,(1988) , 10.1107/S0021889888005746
Robert H. Pearson, Irmin Pascher, The molecular structure of lecithin dihydrate Nature. ,vol. 281, pp. 499- 501 ,(1979) , 10.1038/281499A0
P. H. Watts, W. A. Pangborn, A. Hybl, X-ray structure of racemic glycerol 1,2-(di-11-bromoundecanoate)-3-(-p-toluenesulfonate). Science. ,vol. 175, pp. 60- 61 ,(1972) , 10.1126/SCIENCE.175.4017.60
Sixten Abrahamsson, Birgitta Dahlen, Håkan Löfgren, Irmin Pascher, Lateral packing of hydrocarbon chains. Progress in The Chemistry of Fats and Other Lipids. ,vol. 16, pp. 125- 143 ,(1978) , 10.1016/0079-6832(78)90039-3