Prediction of RNA 1H and 13C Chemical Shifts: A Structure Based Approach

作者: Aaron T. Frank , Sung-Hun Bae , Andrew C. Stelzer

DOI: 10.1021/JP407254M

关键词: Random forestStructure basedReference standardsChemical shiftProtein structureRNASensitivity (control systems)Computational chemistryChemistryBiological systemPhysical and Theoretical ChemistryMaterials ChemistrySurfaces, Coatings and Films

摘要: The use of NMR-derived chemical shifts in protein structure determination and prediction has received much attention, and, as such, many methods have been developed to predict from three-dimensional (3D) coordinates. In contrast, little attention paid predicting RNA Using the random forest machine learning approach, we RAMSEY, which is capable both (1)H protonated (13)C this report, introduce assess its accuracy, demonstrate sensitivity RAMSEY-predicted 3D structure.

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